Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.01■□□□□ 0.63
PAF1Q8N7H5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PAF1Q8N7H5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PAF1Q8N7H5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19■□□□□ 0.63
PAF1Q8N7H5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19■□□□□ 0.63
PAF1Q8N7H5 RCC2P3-201ENST00000418112 1537 ntBASIC19■□□□□ 0.63
PAF1Q8N7H5 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19■□□□□ 0.63
PAF1Q8N7H5 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PAF1Q8N7H5 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 AC005521.1-201ENST00000393351 872 ntBASIC19■□□□□ 0.63
PAF1Q8N7H5 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19■□□□□ 0.63
PAF1Q8N7H5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19■□□□□ 0.63
PAF1Q8N7H5 FAM87A-204ENST00000613235 858 ntBASIC19■□□□□ 0.63
PAF1Q8N7H5 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19■□□□□ 0.63
PAF1Q8N7H5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
PAF1Q8N7H5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PAF1Q8N7H5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19■□□□□ 0.63
PAF1Q8N7H5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PAF1Q8N7H5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19■□□□□ 0.63
PAF1Q8N7H5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PAF1Q8N7H5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 GPAT2P1-201ENST00000444924 1672 ntBASIC18.98■□□□□ 0.63
PAF1Q8N7H5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 AC012306.2-201ENST00000609350 630 ntBASIC18.98■□□□□ 0.63
PAF1Q8N7H5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 AL512353.2-201ENST00000448759 1962 ntBASIC18.98■□□□□ 0.63
PAF1Q8N7H5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PAF1Q8N7H5 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PAF1Q8N7H5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms