Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 AC034236.2-201ENST00000606662 1610 ntBASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH20Q8N6Y1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 KRT18P23-201ENST00000435622 1283 ntBASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 AL359075.1-203ENST00000462729 1002 ntBASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 AC034232.1-201ENST00000506026 1064 ntBASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 AC087388.1-201ENST00000571370 1112 ntBASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH20Q8N6Y1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 SEC1P-202ENST00000473944 940 ntBASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH20Q8N6Y1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDH20Q8N6Y1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDH20Q8N6Y1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDH20Q8N6Y1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 KRT18P38-201ENST00000449496 1282 ntBASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 MTMR9LP-203ENST00000426597 1545 ntBASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDH20Q8N6Y1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH20Q8N6Y1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms