Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 AC009947.2-201ENST00000444014 672 ntBASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC33Q8N5R6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 AL031598.1-201ENST00000561511 1773 ntBASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 AL499627.1-201ENST00000569373 2188 ntBASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 WIZP1-201ENST00000531444 2299 ntBASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC33Q8N5R6 AC138932.1-201ENST00000534164 6830 ntBASIC19.39■□□□□ 0.7
CCDC33Q8N5R6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.39■□□□□ 0.7
CCDC33Q8N5R6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
CCDC33Q8N5R6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC33Q8N5R6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC33Q8N5R6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms