Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB43Q86YS6 AC034232.1-201ENST00000506026 1064 ntBASIC17.67■□□□□ 0.42
RAB43Q86YS6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.67■□□□□ 0.42
RAB43Q86YS6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB43Q86YS6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB43Q86YS6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB43Q86YS6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB43Q86YS6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB43Q86YS6 SDHAP1-207ENST00000440850 2000 ntBASIC17.67■□□□□ 0.42
RAB43Q86YS6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB43Q86YS6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB43Q86YS6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB43Q86YS6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB43Q86YS6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB43Q86YS6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB43Q86YS6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RAB43Q86YS6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB43Q86YS6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB43Q86YS6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RAB43Q86YS6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB43Q86YS6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB43Q86YS6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB43Q86YS6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB43Q86YS6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB43Q86YS6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
RAB43Q86YS6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RAB43Q86YS6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB43Q86YS6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB43Q86YS6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB43Q86YS6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB43Q86YS6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RAB43Q86YS6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB43Q86YS6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB43Q86YS6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB43Q86YS6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB43Q86YS6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RAB43Q86YS6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB43Q86YS6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB43Q86YS6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.66■□□□□ 0.42
RAB43Q86YS6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB43Q86YS6 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.66■□□□□ 0.42
RAB43Q86YS6 AL136038.3-201ENST00000561909 1096 ntBASIC17.66■□□□□ 0.42
RAB43Q86YS6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RAB43Q86YS6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
RAB43Q86YS6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.66■□□□□ 0.42
RAB43Q86YS6 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.66■□□□□ 0.42
RAB43Q86YS6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB43Q86YS6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB43Q86YS6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB43Q86YS6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB43Q86YS6 AC005332.1-201ENST00000577698 1310 ntBASIC17.66■□□□□ 0.42
RAB43Q86YS6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB43Q86YS6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB43Q86YS6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB43Q86YS6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB43Q86YS6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB43Q86YS6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB43Q86YS6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB43Q86YS6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB43Q86YS6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB43Q86YS6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB43Q86YS6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB43Q86YS6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB43Q86YS6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB43Q86YS6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAB43Q86YS6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RAB43Q86YS6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB43Q86YS6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.65■□□□□ 0.42
RAB43Q86YS6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RAB43Q86YS6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB43Q86YS6 ZNF444P1-201ENST00000559497 298 ntBASIC17.65■□□□□ 0.42
RAB43Q86YS6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.65■□□□□ 0.42
RAB43Q86YS6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB43Q86YS6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB43Q86YS6 AC093458.2-201ENST00000623150 629 ntBASIC17.65■□□□□ 0.42
RAB43Q86YS6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.65■□□□□ 0.42
RAB43Q86YS6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB43Q86YS6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAB43Q86YS6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB43Q86YS6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RAB43Q86YS6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB43Q86YS6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAB43Q86YS6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAB43Q86YS6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RAB43Q86YS6 LINC01311-201ENST00000565162 1445 ntBASIC17.64■□□□□ 0.42
RAB43Q86YS6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAB43Q86YS6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB43Q86YS6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB43Q86YS6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB43Q86YS6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB43Q86YS6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB43Q86YS6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB43Q86YS6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB43Q86YS6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB43Q86YS6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB43Q86YS6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB43Q86YS6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB43Q86YS6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB43Q86YS6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB43Q86YS6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms