Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.75■□□□□ 0.27
SHFQ7M4L6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHFQ7M4L6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SHFQ7M4L6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SHFQ7M4L6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHFQ7M4L6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHFQ7M4L6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
SHFQ7M4L6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHFQ7M4L6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHFQ7M4L6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHFQ7M4L6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SHFQ7M4L6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHFQ7M4L6 HLA-L-209ENST00000420110 1011 ntBASIC16.75■□□□□ 0.27
SHFQ7M4L6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.75■□□□□ 0.27
SHFQ7M4L6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHFQ7M4L6 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.75■□□□□ 0.27
SHFQ7M4L6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.75■□□□□ 0.27
SHFQ7M4L6 KRT16P5-201ENST00000455284 522 ntBASIC16.75■□□□□ 0.27
SHFQ7M4L6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
SHFQ7M4L6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHFQ7M4L6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.75■□□□□ 0.27
SHFQ7M4L6 AC068587.9-201ENST00000641814 219 ntBASIC16.75■□□□□ 0.27
SHFQ7M4L6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHFQ7M4L6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHFQ7M4L6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHFQ7M4L6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.75■□□□□ 0.27
SHFQ7M4L6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHFQ7M4L6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHFQ7M4L6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.75■□□□□ 0.27
SHFQ7M4L6 AC106820.2-201ENST00000563775 3264 ntBASIC16.75■□□□□ 0.27
SHFQ7M4L6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.75■□□□□ 0.27
SHFQ7M4L6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
SHFQ7M4L6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.75■□□□□ 0.27
SHFQ7M4L6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHFQ7M4L6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.75■□□□□ 0.27
SHFQ7M4L6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHFQ7M4L6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHFQ7M4L6 PKD1P1-201ENST00000458669 6805 ntBASIC16.74■□□□□ 0.27
SHFQ7M4L6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHFQ7M4L6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.74■□□□□ 0.27
SHFQ7M4L6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHFQ7M4L6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.74■□□□□ 0.27
SHFQ7M4L6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHFQ7M4L6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SHFQ7M4L6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.74■□□□□ 0.27
SHFQ7M4L6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHFQ7M4L6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHFQ7M4L6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SHFQ7M4L6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHFQ7M4L6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SHFQ7M4L6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.74■□□□□ 0.27
SHFQ7M4L6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SHFQ7M4L6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHFQ7M4L6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHFQ7M4L6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.74■□□□□ 0.27
SHFQ7M4L6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SHFQ7M4L6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.73■□□□□ 0.27
SHFQ7M4L6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHFQ7M4L6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHFQ7M4L6 LINC00896-202ENST00000609602 2128 ntBASIC16.73■□□□□ 0.27
SHFQ7M4L6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHFQ7M4L6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.73■□□□□ 0.27
SHFQ7M4L6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.73■□□□□ 0.27
SHFQ7M4L6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHFQ7M4L6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHFQ7M4L6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
SHFQ7M4L6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHFQ7M4L6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHFQ7M4L6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHFQ7M4L6 AC239809.2-201ENST00000415381 517 ntBASIC16.73■□□□□ 0.27
SHFQ7M4L6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.73■□□□□ 0.27
SHFQ7M4L6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.73■□□□□ 0.27
SHFQ7M4L6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
SHFQ7M4L6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.73■□□□□ 0.27
SHFQ7M4L6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHFQ7M4L6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHFQ7M4L6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.73■□□□□ 0.27
SHFQ7M4L6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.73■□□□□ 0.27
SHFQ7M4L6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHFQ7M4L6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.73■□□□□ 0.27
SHFQ7M4L6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHFQ7M4L6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHFQ7M4L6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHFQ7M4L6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHFQ7M4L6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHFQ7M4L6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.72■□□□□ 0.27
SHFQ7M4L6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SHFQ7M4L6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHFQ7M4L6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHFQ7M4L6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHFQ7M4L6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHFQ7M4L6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHFQ7M4L6 KRASP1-201ENST00000407852 552 ntBASIC16.72■□□□□ 0.27
SHFQ7M4L6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHFQ7M4L6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHFQ7M4L6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.72■□□□□ 0.27
SHFQ7M4L6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.72■□□□□ 0.27
SHFQ7M4L6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SHFQ7M4L6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHFQ7M4L6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms