Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.89■□□□□ 0.45
RSPO4Q2I0M5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 BCRP1-201ENST00000444246 691 ntBASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 YBX1P5-201ENST00000509441 847 ntBASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 AC105339.3-201ENST00000560043 636 ntBASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 AL096865.1-201ENST00000606796 927 ntBASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RSPO4Q2I0M5 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 MCCD1P2-201ENST00000423228 335 ntBASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 AC009533.2-201ENST00000543664 586 ntBASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RSPO4Q2I0M5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RSPO4Q2I0M5 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms