Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 AC005363.2-201ENST00000618631 242 ntBASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 AC104581.1-202ENST00000635932 2618 ntBASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RASGEF1BQ0VAM2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 AC005082.1-201ENST00000413042 2259 ntBASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 AL512353.2-201ENST00000448759 1962 ntBASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 HMGA1P5-201ENST00000412453 271 ntBASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 SLC25A3P1-201ENST00000443844 931 ntBASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 AC135050.7-201ENST00000624508 2218 ntBASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RASGEF1BQ0VAM2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 FAM87A-204ENST00000613235 858 ntBASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 AC008622.2-201ENST00000617006 1229 ntBASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RASGEF1BQ0VAM2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RASGEF1BQ0VAM2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RASGEF1BQ0VAM2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.8■□□□□ 0.28
RASGEF1BQ0VAM2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RASGEF1BQ0VAM2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.8■□□□□ 0.28
RASGEF1BQ0VAM2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RASGEF1BQ0VAM2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms