Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEP78395 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PRAMEP78395 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEP78395 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
PRAMEP78395 AC112777.1-201ENST00000540175 1423 ntBASIC18.68■□□□□ 0.58
PRAMEP78395 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEP78395 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.68■□□□□ 0.58
PRAMEP78395 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEP78395 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PRAMEP78395 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.68■□□□□ 0.58
PRAMEP78395 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.68■□□□□ 0.58
PRAMEP78395 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.68■□□□□ 0.58
PRAMEP78395 MIR4497-201ENST00000583208 89 ntBASIC18.68■□□□□ 0.58
PRAMEP78395 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEP78395 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEP78395 AC079598.2-202ENST00000546624 1451 ntBASIC18.68■□□□□ 0.58
PRAMEP78395 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEP78395 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEP78395 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
PRAMEP78395 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEP78395 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.68■□□□□ 0.58
PRAMEP78395 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEP78395 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PRAMEP78395 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEP78395 AC073592.3-201ENST00000625118 1834 ntBASIC18.67■□□□□ 0.58
PRAMEP78395 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.67■□□□□ 0.58
PRAMEP78395 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEP78395 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEP78395 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
PRAMEP78395 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEP78395 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PRAMEP78395 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEP78395 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEP78395 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEP78395 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEP78395 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PRAMEP78395 MIR1238-201ENST00000408483 83 ntBASIC18.67■□□□□ 0.58
PRAMEP78395 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.67■□□□□ 0.58
PRAMEP78395 AL355075.4-201ENST00000554988 638 ntBASIC18.67■□□□□ 0.58
PRAMEP78395 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEP78395 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PRAMEP78395 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.67■□□□□ 0.58
PRAMEP78395 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEP78395 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.67■□□□□ 0.58
PRAMEP78395 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEP78395 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.67■□□□□ 0.58
PRAMEP78395 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEP78395 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEP78395 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
PRAMEP78395 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEP78395 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.67■□□□□ 0.58
PRAMEP78395 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PRAMEP78395 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.67■□□□□ 0.58
PRAMEP78395 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 KRT8P45-201ENST00000414328 1447 ntBASIC18.66■□□□□ 0.58
PRAMEP78395 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PRAMEP78395 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PRAMEP78395 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
PRAMEP78395 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.66■□□□□ 0.58
PRAMEP78395 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PRAMEP78395 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.66■□□□□ 0.58
PRAMEP78395 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.66■□□□□ 0.58
PRAMEP78395 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 AL390955.1-201ENST00000428694 934 ntBASIC18.66■□□□□ 0.58
PRAMEP78395 SLC25A1P2-201ENST00000430693 912 ntBASIC18.66■□□□□ 0.58
PRAMEP78395 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.66■□□□□ 0.58
PRAMEP78395 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.66■□□□□ 0.58
PRAMEP78395 FITM1-202ENST00000559294 800 ntBASIC18.66■□□□□ 0.58
PRAMEP78395 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.66■□□□□ 0.58
PRAMEP78395 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
PRAMEP78395 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRAMEP78395 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEP78395 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEP78395 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEP78395 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRAMEP78395 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms