Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.73■□□□□ 0.27
RPS4XP62701 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4XP62701 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4XP62701 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RPS4XP62701 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
RPS4XP62701 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.73■□□□□ 0.27
RPS4XP62701 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4XP62701 TERF1P1-201ENST00000311003 1181 ntBASIC16.73■□□□□ 0.27
RPS4XP62701 MIR564-202ENST00000385049 94 ntBASIC16.73■□□□□ 0.27
RPS4XP62701 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4XP62701 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.73■□□□□ 0.27
RPS4XP62701 MCCD1P1-208ENST00000445732 328 ntBASIC16.73■□□□□ 0.27
RPS4XP62701 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.73■□□□□ 0.27
RPS4XP62701 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.73■□□□□ 0.27
RPS4XP62701 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.73■□□□□ 0.27
RPS4XP62701 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4XP62701 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4XP62701 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4XP62701 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.73■□□□□ 0.27
RPS4XP62701 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.73■□□□□ 0.27
RPS4XP62701 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4XP62701 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4XP62701 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
RPS4XP62701 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4XP62701 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RPS4XP62701 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4XP62701 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4XP62701 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4XP62701 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4XP62701 NOC2LP2-201ENST00000407594 1944 ntBASIC16.72■□□□□ 0.27
RPS4XP62701 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4XP62701 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4XP62701 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4XP62701 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4XP62701 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4XP62701 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4XP62701 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RPS4XP62701 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4XP62701 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4XP62701 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4XP62701 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.72■□□□□ 0.27
RPS4XP62701 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.72■□□□□ 0.27
RPS4XP62701 AP000593.1-201ENST00000393668 712 ntBASIC16.72■□□□□ 0.27
RPS4XP62701 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.72■□□□□ 0.27
RPS4XP62701 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.72■□□□□ 0.27
RPS4XP62701 LIN28AP1-201ENST00000429574 405 ntBASIC16.72■□□□□ 0.27
RPS4XP62701 AC097488.1-201ENST00000507834 756 ntBASIC16.72■□□□□ 0.27
RPS4XP62701 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.72■□□□□ 0.27
RPS4XP62701 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.72■□□□□ 0.27
RPS4XP62701 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.72■□□□□ 0.27
RPS4XP62701 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4XP62701 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4XP62701 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.72■□□□□ 0.27
RPS4XP62701 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RPS4XP62701 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RPS4XP62701 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4XP62701 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4XP62701 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
RPS4XP62701 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
RPS4XP62701 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4XP62701 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4XP62701 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.71■□□□□ 0.27
RPS4XP62701 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4XP62701 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4XP62701 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.71■□□□□ 0.27
RPS4XP62701 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4XP62701 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4XP62701 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4XP62701 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.71■□□□□ 0.27
RPS4XP62701 AC135776.1-201ENST00000319817 2481 ntBASIC16.71■□□□□ 0.27
RPS4XP62701 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4XP62701 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4XP62701 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4XP62701 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.71■□□□□ 0.27
RPS4XP62701 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4XP62701 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.71■□□□□ 0.27
RPS4XP62701 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.71■□□□□ 0.27
RPS4XP62701 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RPS4XP62701 AP005242.2-201ENST00000580065 1175 ntBASIC16.71■□□□□ 0.27
RPS4XP62701 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4XP62701 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.71■□□□□ 0.27
RPS4XP62701 AC093677.2-201ENST00000600169 1863 ntBASIC16.71■□□□□ 0.27
RPS4XP62701 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4XP62701 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
RPS4XP62701 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RPS4XP62701 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
RPS4XP62701 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4XP62701 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RPS4XP62701 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4XP62701 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.7■□□□□ 0.26
RPS4XP62701 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4XP62701 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4XP62701 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4XP62701 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.7■□□□□ 0.26
RPS4XP62701 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4XP62701 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4XP62701 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4XP62701 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RPS4XP62701 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4XP62701 ATP5G1P1-201ENST00000448724 379 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms