Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP4BP1P59074 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.13■□□□□ 0.97
CHMP4BP1P59074 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP4BP1P59074 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.13■□□□□ 0.97
CHMP4BP1P59074 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.13■□□□□ 0.97
CHMP4BP1P59074 DUSP5P1-201ENST00000441325 1139 ntBASIC21.13■□□□□ 0.97
CHMP4BP1P59074 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
CHMP4BP1P59074 CLEC4GP1-201ENST00000596555 870 ntBASIC21.13■□□□□ 0.97
CHMP4BP1P59074 AC012313.10-201ENST00000623509 926 ntBASIC21.13■□□□□ 0.97
CHMP4BP1P59074 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.13■□□□□ 0.97
CHMP4BP1P59074 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP4BP1P59074 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP4BP1P59074 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP4BP1P59074 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP4BP1P59074 AL032819.2-201ENST00000624543 2162 ntBASIC21.13■□□□□ 0.97
CHMP4BP1P59074 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP4BP1P59074 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
CHMP4BP1P59074 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
CHMP4BP1P59074 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP4BP1P59074 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP4BP1P59074 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP4BP1P59074 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP4BP1P59074 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP4BP1P59074 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CHMP4BP1P59074 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP4BP1P59074 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP4BP1P59074 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP4BP1P59074 AC092597.1-201ENST00000487352 616 ntBASIC21.12■□□□□ 0.97
CHMP4BP1P59074 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.12■□□□□ 0.97
CHMP4BP1P59074 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.12■□□□□ 0.97
CHMP4BP1P59074 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP4BP1P59074 HYMAI.1-201ENST00000620949 238 ntBASIC21.12■□□□□ 0.97
CHMP4BP1P59074 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP4BP1P59074 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.12■□□□□ 0.97
CHMP4BP1P59074 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.12■□□□□ 0.97
CHMP4BP1P59074 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.12■□□□□ 0.97
CHMP4BP1P59074 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP4BP1P59074 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP4BP1P59074 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP4BP1P59074 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP4BP1P59074 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP4BP1P59074 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.11■□□□□ 0.97
CHMP4BP1P59074 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CHMP4BP1P59074 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP4BP1P59074 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
CHMP4BP1P59074 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP4BP1P59074 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.11■□□□□ 0.97
CHMP4BP1P59074 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP4BP1P59074 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP4BP1P59074 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP4BP1P59074 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CHMP4BP1P59074 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP4BP1P59074 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CHMP4BP1P59074 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.11■□□□□ 0.97
CHMP4BP1P59074 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP4BP1P59074 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP4BP1P59074 AL049812.1-201ENST00000432563 2267 ntBASIC21.11■□□□□ 0.97
CHMP4BP1P59074 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.1■□□□□ 0.97
CHMP4BP1P59074 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP4BP1P59074 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.09■□□□□ 0.97
CHMP4BP1P59074 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP4BP1P59074 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CHMP4BP1P59074 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP4BP1P59074 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.09■□□□□ 0.97
CHMP4BP1P59074 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP4BP1P59074 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP4BP1P59074 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP4BP1P59074 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CHMP4BP1P59074 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP4BP1P59074 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP4BP1P59074 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.09■□□□□ 0.97
CHMP4BP1P59074 TSPY21P-201ENST00000433481 731 ntBASIC21.09■□□□□ 0.97
CHMP4BP1P59074 TPM4P1-201ENST00000436100 807 ntBASIC21.09■□□□□ 0.97
CHMP4BP1P59074 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.09■□□□□ 0.97
CHMP4BP1P59074 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms