Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATXN3P54252 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATXN3P54252 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATXN3P54252 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATXN3P54252 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.89■□□□□ 0.61
ATXN3P54252 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATXN3P54252 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.88■□□□□ 0.61
ATXN3P54252 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
ATXN3P54252 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.88■□□□□ 0.61
ATXN3P54252 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.88■□□□□ 0.61
ATXN3P54252 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 ATP5G2P1-201ENST00000433580 426 ntBASIC18.88■□□□□ 0.61
ATXN3P54252 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.88■□□□□ 0.61
ATXN3P54252 AC083849.1-201ENST00000615227 514 ntBASIC18.88■□□□□ 0.61
ATXN3P54252 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.88■□□□□ 0.61
ATXN3P54252 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
ATXN3P54252 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.88■□□□□ 0.61
ATXN3P54252 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ATXN3P54252 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
ATXN3P54252 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.88■□□□□ 0.61
ATXN3P54252 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.88■□□□□ 0.61
ATXN3P54252 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ATXN3P54252 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3P54252 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
ATXN3P54252 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3P54252 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3P54252 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3P54252 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
ATXN3P54252 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3P54252 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3P54252 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3P54252 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.87■□□□□ 0.61
ATXN3P54252 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
ATXN3P54252 LINC01465-201ENST00000408887 1940 ntBASIC18.87■□□□□ 0.61
ATXN3P54252 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.87■□□□□ 0.61
ATXN3P54252 AL049812.1-201ENST00000432563 2267 ntBASIC18.87■□□□□ 0.61
ATXN3P54252 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.87■□□□□ 0.61
ATXN3P54252 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3P54252 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
ATXN3P54252 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
ATXN3P54252 MIR3652-201ENST00000579335 131 ntBASIC18.87■□□□□ 0.61
ATXN3P54252 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.87■□□□□ 0.61
ATXN3P54252 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
ATXN3P54252 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ATXN3P54252 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3P54252 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3P54252 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3P54252 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
ATXN3P54252 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3P54252 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ATXN3P54252 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3P54252 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3P54252 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3P54252 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
ATXN3P54252 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ATXN3P54252 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3P54252 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.86■□□□□ 0.61
ATXN3P54252 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3P54252 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ATXN3P54252 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ATXN3P54252 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.86■□□□□ 0.61
ATXN3P54252 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3P54252 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3P54252 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3P54252 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3P54252 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.86■□□□□ 0.61
ATXN3P54252 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.86■□□□□ 0.61
ATXN3P54252 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.86■□□□□ 0.61
ATXN3P54252 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
ATXN3P54252 GCSHP2-201ENST00000560971 527 ntBASIC18.86■□□□□ 0.61
ATXN3P54252 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.86■□□□□ 0.61
ATXN3P54252 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
ATXN3P54252 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms