Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
HMGA2P52926 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA2P52926 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
HMGA2P52926 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA2P52926 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA2P52926 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA2P52926 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA2P52926 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HMGA2P52926 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA2P52926 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA2P52926 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA2P52926 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA2P52926 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA2P52926 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA2P52926 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA2P52926 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA2P52926 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA2P52926 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA2P52926 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA2P52926 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA2P52926 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HMGA2P52926 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA2P52926 AP002982.1-201ENST00000492365 877 ntBASIC16.91■□□□□ 0.3
HMGA2P52926 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.91■□□□□ 0.3
HMGA2P52926 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.91■□□□□ 0.3
HMGA2P52926 RN7SL471P-201ENST00000580476 299 ntBASIC16.91■□□□□ 0.3
HMGA2P52926 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.91■□□□□ 0.3
HMGA2P52926 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA2P52926 AL031985.4-201ENST00000642138 673 ntBASIC16.91■□□□□ 0.3
HMGA2P52926 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA2P52926 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HMGA2P52926 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA2P52926 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA2P52926 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.91■□□□□ 0.3
HMGA2P52926 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA2P52926 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.91■□□□□ 0.3
HMGA2P52926 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.91■□□□□ 0.3
HMGA2P52926 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HMGA2P52926 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
HMGA2P52926 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMGA2P52926 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HMGA2P52926 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.9■□□□□ 0.3
HMGA2P52926 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HMGA2P52926 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGA2P52926 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGA2P52926 AC012317.2-201ENST00000623305 2251 ntBASIC16.9■□□□□ 0.3
HMGA2P52926 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HMGA2P52926 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGA2P52926 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGA2P52926 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.9■□□□□ 0.3
HMGA2P52926 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMGA2P52926 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGA2P52926 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGA2P52926 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGA2P52926 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HMGA2P52926 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.9■□□□□ 0.3
HMGA2P52926 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMGA2P52926 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HMGA2P52926 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGA2P52926 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
HMGA2P52926 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.9■□□□□ 0.3
HMGA2P52926 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
HMGA2P52926 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.9■□□□□ 0.3
HMGA2P52926 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.9■□□□□ 0.3
HMGA2P52926 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.9■□□□□ 0.3
HMGA2P52926 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
HMGA2P52926 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGA2P52926 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.9■□□□□ 0.3
HMGA2P52926 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGA2P52926 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGA2P52926 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.9■□□□□ 0.3
HMGA2P52926 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGA2P52926 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HMGA2P52926 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGA2P52926 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HMGA2P52926 AIRN-201ENST00000601203 4374 ntBASIC16.9■□□□□ 0.3
HMGA2P52926 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGA2P52926 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMGA2P52926 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HMGA2P52926 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGA2P52926 AC006116.8-202ENST00000587620 1550 ntBASIC16.89■□□□□ 0.3
HMGA2P52926 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
HMGA2P52926 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HMGA2P52926 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HMGA2P52926 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HMGA2P52926 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HMGA2P52926 AC034236.2-201ENST00000606662 1610 ntBASIC16.89■□□□□ 0.29
HMGA2P52926 KRT16P1-201ENST00000399124 1418 ntBASIC16.89■□□□□ 0.29
HMGA2P52926 KRT8P50-201ENST00000562022 1438 ntBASIC16.89■□□□□ 0.29
HMGA2P52926 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGA2P52926 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGA2P52926 AL645608.8-201ENST00000606034 2086 ntBASIC16.89■□□□□ 0.29
HMGA2P52926 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGA2P52926 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGA2P52926 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.89■□□□□ 0.29
HMGA2P52926 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGA2P52926 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGA2P52926 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.89■□□□□ 0.29
HMGA2P52926 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HMGA2P52926 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms