Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 WIZP1-201ENST00000531444 2299 ntBASIC20.89■□□□□ 0.94
USP11P51784 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP11P51784 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP11P51784 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP11P51784 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.89■□□□□ 0.93
USP11P51784 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP11P51784 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP11P51784 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.89■□□□□ 0.93
USP11P51784 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP11P51784 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.89■□□□□ 0.93
USP11P51784 AC083849.1-201ENST00000615227 514 ntBASIC20.89■□□□□ 0.93
USP11P51784 AL121956.5-201ENST00000625261 221 ntBASIC20.89■□□□□ 0.93
USP11P51784 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP11P51784 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP11P51784 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
USP11P51784 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP11P51784 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.89■□□□□ 0.93
USP11P51784 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.89■□□□□ 0.93
USP11P51784 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
USP11P51784 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP11P51784 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
USP11P51784 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP11P51784 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP11P51784 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
USP11P51784 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.88■□□□□ 0.93
USP11P51784 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP11P51784 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
USP11P51784 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP11P51784 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP11P51784 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP11P51784 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP11P51784 ARMC10P1-201ENST00000313754 855 ntBASIC20.88■□□□□ 0.93
USP11P51784 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP11P51784 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP11P51784 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.88■□□□□ 0.93
USP11P51784 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.88■□□□□ 0.93
USP11P51784 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.88■□□□□ 0.93
USP11P51784 ZNF444P1-201ENST00000559497 298 ntBASIC20.88■□□□□ 0.93
USP11P51784 AC087388.1-201ENST00000571370 1112 ntBASIC20.88■□□□□ 0.93
USP11P51784 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.88■□□□□ 0.93
USP11P51784 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP11P51784 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP11P51784 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.88■□□□□ 0.93
USP11P51784 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP11P51784 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP11P51784 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP11P51784 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.88■□□□□ 0.93
USP11P51784 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP11P51784 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP11P51784 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP11P51784 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP11P51784 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP11P51784 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP11P51784 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.87■□□□□ 0.93
USP11P51784 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP11P51784 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP11P51784 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.87■□□□□ 0.93
USP11P51784 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.87■□□□□ 0.93
USP11P51784 AL136038.3-201ENST00000561909 1096 ntBASIC20.87■□□□□ 0.93
USP11P51784 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
USP11P51784 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.87■□□□□ 0.93
USP11P51784 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.87■□□□□ 0.93
USP11P51784 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP11P51784 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.87■□□□□ 0.93
USP11P51784 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP11P51784 AIRN-201ENST00000601203 4374 ntBASIC20.87■□□□□ 0.93
USP11P51784 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.87■□□□□ 0.93
USP11P51784 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP11P51784 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP11P51784 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
USP11P51784 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP11P51784 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.86■□□□□ 0.93
USP11P51784 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP11P51784 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
USP11P51784 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP11P51784 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP11P51784 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.86■□□□□ 0.93
USP11P51784 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
USP11P51784 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.86■□□□□ 0.93
USP11P51784 MIR662-201ENST00000384847 95 ntBASIC20.86■□□□□ 0.93
USP11P51784 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP11P51784 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP11P51784 SPDYE13P-201ENST00000445314 798 ntBASIC20.86■□□□□ 0.93
USP11P51784 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.86■□□□□ 0.93
USP11P51784 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.86■□□□□ 0.93
USP11P51784 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
USP11P51784 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP11P51784 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.86■□□□□ 0.93
USP11P51784 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.86■□□□□ 0.93
USP11P51784 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP11P51784 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP11P51784 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.86■□□□□ 0.93
USP11P51784 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.86■□□□□ 0.93
USP11P51784 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP11P51784 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
USP11P51784 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP11P51784 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP11P51784 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.85■□□□□ 0.93
USP11P51784 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP11P51784 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms