Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RNF144AP50876 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.23■□□□□ 0.35
RNF144AP50876 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF144AP50876 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF144AP50876 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.23■□□□□ 0.35
RNF144AP50876 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.23■□□□□ 0.35
RNF144AP50876 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF144AP50876 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF144AP50876 CYP2D8P-201ENST00000433633 1490 ntBASIC17.23■□□□□ 0.35
RNF144AP50876 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF144AP50876 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RNF144AP50876 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF144AP50876 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF144AP50876 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RNF144AP50876 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF144AP50876 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF144AP50876 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF144AP50876 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF144AP50876 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF144AP50876 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF144AP50876 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF144AP50876 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF144AP50876 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF144AP50876 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF144AP50876 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF144AP50876 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF144AP50876 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF144AP50876 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF144AP50876 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF144AP50876 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.22■□□□□ 0.35
RNF144AP50876 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF144AP50876 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF144AP50876 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF144AP50876 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF144AP50876 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF144AP50876 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RNF144AP50876 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF144AP50876 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF144AP50876 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF144AP50876 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF144AP50876 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF144AP50876 KRT17P2-201ENST00000300992 1314 ntBASIC17.21■□□□□ 0.35
RNF144AP50876 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF144AP50876 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF144AP50876 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF144AP50876 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RNF144AP50876 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF144AP50876 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF144AP50876 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF144AP50876 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RNF144AP50876 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RNF144AP50876 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF144AP50876 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF144AP50876 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF144AP50876 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF144AP50876 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF144AP50876 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RNF144AP50876 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF144AP50876 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF144AP50876 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.21■□□□□ 0.35
RNF144AP50876 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RNF144AP50876 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF144AP50876 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF144AP50876 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF144AP50876 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF144AP50876 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF144AP50876 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
RNF144AP50876 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF144AP50876 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF144AP50876 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF144AP50876 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF144AP50876 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNF144AP50876 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
RNF144AP50876 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNF144AP50876 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.34
RNF144AP50876 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RNF144AP50876 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF144AP50876 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF144AP50876 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF144AP50876 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF144AP50876 AC036111.1-201ENST00000533973 1582 ntBASIC17.2■□□□□ 0.34
RNF144AP50876 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF144AP50876 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RNF144AP50876 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF144AP50876 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF144AP50876 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF144AP50876 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RNF144AP50876 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF144AP50876 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF144AP50876 FITM1-202ENST00000559294 800 ntBASIC17.2■□□□□ 0.34
RNF144AP50876 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
RNF144AP50876 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF144AP50876 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF144AP50876 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RNF144AP50876 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF144AP50876 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF144AP50876 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF144AP50876 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF144AP50876 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF144AP50876 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms