Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AP000593.1-201ENST00000393668 712 ntBASIC19.68■□□□□ 0.74
BRCC3P46736 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
BRCC3P46736 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.68■□□□□ 0.74
BRCC3P46736 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.68■□□□□ 0.74
BRCC3P46736 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.68■□□□□ 0.74
BRCC3P46736 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.68■□□□□ 0.74
BRCC3P46736 TPSP2-201ENST00000561760 610 ntBASIC19.68■□□□□ 0.74
BRCC3P46736 AC009065.1-201ENST00000564055 1225 ntBASIC19.68■□□□□ 0.74
BRCC3P46736 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.68■□□□□ 0.74
BRCC3P46736 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.68■□□□□ 0.74
BRCC3P46736 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
BRCC3P46736 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BRCC3P46736 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRCC3P46736 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRCC3P46736 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRCC3P46736 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
BRCC3P46736 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.68■□□□□ 0.74
BRCC3P46736 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRCC3P46736 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRCC3P46736 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.67■□□□□ 0.74
BRCC3P46736 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
BRCC3P46736 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRCC3P46736 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRCC3P46736 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRCC3P46736 IGHGP-201ENST00000390555 1178 ntBASIC19.67■□□□□ 0.74
BRCC3P46736 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.67■□□□□ 0.74
BRCC3P46736 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.67■□□□□ 0.74
BRCC3P46736 GPR32P1-201ENST00000601788 811 ntBASIC19.67■□□□□ 0.74
BRCC3P46736 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRCC3P46736 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
BRCC3P46736 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
BRCC3P46736 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRCC3P46736 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRCC3P46736 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
BRCC3P46736 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRCC3P46736 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.66■□□□□ 0.74
BRCC3P46736 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRCC3P46736 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.66■□□□□ 0.74
BRCC3P46736 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRCC3P46736 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRCC3P46736 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
BRCC3P46736 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRCC3P46736 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRCC3P46736 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRCC3P46736 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.66■□□□□ 0.74
BRCC3P46736 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRCC3P46736 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRCC3P46736 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRCC3P46736 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRCC3P46736 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.66■□□□□ 0.74
BRCC3P46736 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.66■□□□□ 0.74
BRCC3P46736 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.66■□□□□ 0.74
BRCC3P46736 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
BRCC3P46736 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.66■□□□□ 0.74
BRCC3P46736 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRCC3P46736 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.66■□□□□ 0.74
BRCC3P46736 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.66■□□□□ 0.74
BRCC3P46736 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRCC3P46736 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRCC3P46736 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRCC3P46736 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
BRCC3P46736 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.66■□□□□ 0.74
BRCC3P46736 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRCC3P46736 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRCC3P46736 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
BRCC3P46736 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRCC3P46736 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRCC3P46736 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
BRCC3P46736 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRCC3P46736 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRCC3P46736 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRCC3P46736 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
BRCC3P46736 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.65■□□□□ 0.74
BRCC3P46736 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRCC3P46736 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.65■□□□□ 0.74
BRCC3P46736 LINC00265-3P-201ENST00000447588 903 ntBASIC19.65■□□□□ 0.74
BRCC3P46736 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.65■□□□□ 0.74
BRCC3P46736 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.65■□□□□ 0.74
BRCC3P46736 PRELID1P1-202ENST00000567272 903 ntBASIC19.65■□□□□ 0.74
BRCC3P46736 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRCC3P46736 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRCC3P46736 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRCC3P46736 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRCC3P46736 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRCC3P46736 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
BRCC3P46736 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRCC3P46736 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRCC3P46736 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRCC3P46736 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRCC3P46736 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRCC3P46736 DRAXINP1-201ENST00000437611 948 ntBASIC19.64■□□□□ 0.73
BRCC3P46736 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.64■□□□□ 0.73
BRCC3P46736 TOB2P1-201ENST00000469761 992 ntBASIC19.64■□□□□ 0.73
BRCC3P46736 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.64■□□□□ 0.73
BRCC3P46736 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.64■□□□□ 0.73
BRCC3P46736 AP000867.3-201ENST00000524675 377 ntBASIC19.64■□□□□ 0.73
BRCC3P46736 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.64■□□□□ 0.73
BRCC3P46736 IGHV3-41-201ENST00000613121 348 ntBASIC19.64■□□□□ 0.73
BRCC3P46736 AC120498.9-201ENST00000339021 3867 ntBASIC19.64■□□□□ 0.73
BRCC3P46736 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms