Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC1A3P43003 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SLC1A3P43003 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A3P43003 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SLC1A3P43003 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC1A3P43003 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A3P43003 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A3P43003 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC1A3P43003 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A3P43003 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC1A3P43003 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A3P43003 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A3P43003 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SLC1A3P43003 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A3P43003 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
SLC1A3P43003 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC1A3P43003 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC1A3P43003 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC1A3P43003 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A3P43003 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A3P43003 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A3P43003 ABALON-201ENST00000629058 1903 ntBASIC17.04■□□□□ 0.32
SLC1A3P43003 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A3P43003 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A3P43003 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A3P43003 SLC25A1P2-201ENST00000430693 912 ntBASIC17.04■□□□□ 0.32
SLC1A3P43003 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC1A3P43003 FITM1-202ENST00000559294 800 ntBASIC17.04■□□□□ 0.32
SLC1A3P43003 AP000525.1-201ENST00000608286 694 ntBASIC17.04■□□□□ 0.32
SLC1A3P43003 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC1A3P43003 AL357033.4-201ENST00000617703 1807 ntBASIC17.04■□□□□ 0.32
SLC1A3P43003 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A3P43003 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A3P43003 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A3P43003 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SLC1A3P43003 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A3P43003 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC1A3P43003 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC1A3P43003 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC1A3P43003 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SLC1A3P43003 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A3P43003 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SLC1A3P43003 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SLC1A3P43003 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC1A3P43003 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SLC1A3P43003 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC1A3P43003 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.03■□□□□ 0.32
SLC1A3P43003 AL355075.4-201ENST00000554988 638 ntBASIC17.03■□□□□ 0.32
SLC1A3P43003 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.03■□□□□ 0.32
SLC1A3P43003 AC090340.1-201ENST00000620778 4980 ntBASIC17.03■□□□□ 0.32
SLC1A3P43003 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC1A3P43003 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC1A3P43003 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC1A3P43003 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
SLC1A3P43003 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC1A3P43003 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SLC1A3P43003 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 AP000997.3-201ENST00000623333 2250 ntBASIC17.03■□□□□ 0.32
SLC1A3P43003 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC1A3P43003 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A3P43003 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A3P43003 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SLC1A3P43003 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A3P43003 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A3P43003 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A3P43003 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SLC1A3P43003 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SLC1A3P43003 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A3P43003 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC1A3P43003 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SLC1A3P43003 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC1A3P43003 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A3P43003 AL023284.2-201ENST00000405850 579 ntBASIC17.02■□□□□ 0.32
SLC1A3P43003 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC1A3P43003 MYC-208ENST00000641036 567 ntBASIC17.02■□□□□ 0.32
SLC1A3P43003 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.02■□□□□ 0.31
SLC1A3P43003 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SLC1A3P43003 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SLC1A3P43003 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms