Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX6P35712 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX6P35712 AC108860.2-201ENST00000562760 2183 ntBASIC16.62■□□□□ 0.25
SOX6P35712 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX6P35712 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.62■□□□□ 0.25
SOX6P35712 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.62■□□□□ 0.25
SOX6P35712 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX6P35712 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX6P35712 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.62■□□□□ 0.25
SOX6P35712 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX6P35712 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SOX6P35712 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX6P35712 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX6P35712 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.62■□□□□ 0.25
SOX6P35712 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX6P35712 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.62■□□□□ 0.25
SOX6P35712 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
SOX6P35712 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.61■□□□□ 0.25
SOX6P35712 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
SOX6P35712 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SOX6P35712 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX6P35712 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX6P35712 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.61■□□□□ 0.25
SOX6P35712 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.61■□□□□ 0.25
SOX6P35712 UBE2DNL-204ENST00000602536 740 ntBASIC16.61■□□□□ 0.25
SOX6P35712 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX6P35712 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX6P35712 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SOX6P35712 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SOX6P35712 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOX6P35712 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX6P35712 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.6■□□□□ 0.25
SOX6P35712 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX6P35712 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.6■□□□□ 0.25
SOX6P35712 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
SOX6P35712 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX6P35712 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX6P35712 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX6P35712 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX6P35712 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX6P35712 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.6■□□□□ 0.25
SOX6P35712 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.6■□□□□ 0.25
SOX6P35712 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SOX6P35712 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX6P35712 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.6■□□□□ 0.25
SOX6P35712 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.6■□□□□ 0.25
SOX6P35712 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.6■□□□□ 0.25
SOX6P35712 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.6■□□□□ 0.25
SOX6P35712 AL137784.2-201ENST00000607332 1000 ntBASIC16.6■□□□□ 0.25
SOX6P35712 AC100791.3-201ENST00000617619 330 ntBASIC16.6■□□□□ 0.25
SOX6P35712 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX6P35712 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX6P35712 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.6■□□□□ 0.25
SOX6P35712 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX6P35712 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SOX6P35712 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX6P35712 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.6■□□□□ 0.25
SOX6P35712 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.6■□□□□ 0.25
SOX6P35712 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.6■□□□□ 0.25
SOX6P35712 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SOX6P35712 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SOX6P35712 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX6P35712 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX6P35712 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX6P35712 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX6P35712 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX6P35712 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.59■□□□□ 0.25
SOX6P35712 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.59■□□□□ 0.25
SOX6P35712 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX6P35712 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX6P35712 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX6P35712 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX6P35712 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.59■□□□□ 0.25
SOX6P35712 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.59■□□□□ 0.25
SOX6P35712 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX6P35712 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX6P35712 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SOX6P35712 AL162412.1-201ENST00000567129 965 ntBASIC16.59■□□□□ 0.25
SOX6P35712 MYCNOS-205ENST00000641950 531 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms