Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.79■□□□□ 0.28
GDF1P27539 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GDF1P27539 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.79■□□□□ 0.28
GDF1P27539 AC079602.3-201ENST00000623931 403 ntBASIC16.79■□□□□ 0.28
GDF1P27539 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.79■□□□□ 0.28
GDF1P27539 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
GDF1P27539 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDF1P27539 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
GDF1P27539 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
GDF1P27539 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDF1P27539 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GDF1P27539 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDF1P27539 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.79■□□□□ 0.28
GDF1P27539 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDF1P27539 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDF1P27539 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GDF1P27539 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GDF1P27539 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GDF1P27539 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDF1P27539 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDF1P27539 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDF1P27539 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDF1P27539 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
GDF1P27539 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDF1P27539 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDF1P27539 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
GDF1P27539 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDF1P27539 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDF1P27539 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.78■□□□□ 0.28
GDF1P27539 AL391807.1-203ENST00000604392 2365 ntBASIC16.78■□□□□ 0.28
GDF1P27539 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.78■□□□□ 0.28
GDF1P27539 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDF1P27539 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDF1P27539 AP000593.1-201ENST00000393668 712 ntBASIC16.78■□□□□ 0.28
GDF1P27539 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.78■□□□□ 0.28
GDF1P27539 MIR3180-4-201ENST00000582223 153 ntBASIC16.78■□□□□ 0.28
GDF1P27539 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
GDF1P27539 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.78■□□□□ 0.28
GDF1P27539 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GDF1P27539 AC093458.2-201ENST00000623150 629 ntBASIC16.78■□□□□ 0.28
GDF1P27539 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.78■□□□□ 0.28
GDF1P27539 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDF1P27539 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDF1P27539 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDF1P27539 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GDF1P27539 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDF1P27539 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDF1P27539 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDF1P27539 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GDF1P27539 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GDF1P27539 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.77■□□□□ 0.28
GDF1P27539 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GDF1P27539 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
GDF1P27539 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GDF1P27539 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
GDF1P27539 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GDF1P27539 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.77■□□□□ 0.28
GDF1P27539 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GDF1P27539 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.77■□□□□ 0.28
GDF1P27539 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
GDF1P27539 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GDF1P27539 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.77■□□□□ 0.28
GDF1P27539 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GDF1P27539 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.77■□□□□ 0.28
GDF1P27539 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.77■□□□□ 0.28
GDF1P27539 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.77■□□□□ 0.28
GDF1P27539 SPDYE13P-201ENST00000445314 798 ntBASIC16.77■□□□□ 0.28
GDF1P27539 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GDF1P27539 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.77■□□□□ 0.28
GDF1P27539 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.77■□□□□ 0.28
GDF1P27539 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.77■□□□□ 0.28
GDF1P27539 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
GDF1P27539 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
GDF1P27539 AC116407.4-201ENST00000623319 1061 ntBASIC16.77■□□□□ 0.28
GDF1P27539 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GDF1P27539 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
GDF1P27539 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.77■□□□□ 0.27
GDF1P27539 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.77■□□□□ 0.27
GDF1P27539 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GDF1P27539 KRT8P50-201ENST00000562022 1438 ntBASIC16.77■□□□□ 0.27
GDF1P27539 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
GDF1P27539 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GDF1P27539 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
GDF1P27539 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.77■□□□□ 0.27
GDF1P27539 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GDF1P27539 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GDF1P27539 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
GDF1P27539 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.77■□□□□ 0.27
GDF1P27539 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
GDF1P27539 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GDF1P27539 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.76■□□□□ 0.27
GDF1P27539 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDF1P27539 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDF1P27539 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDF1P27539 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GDF1P27539 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.76■□□□□ 0.27
GDF1P27539 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GDF1P27539 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GDF1P27539 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.76■□□□□ 0.27
GDF1P27539 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms