Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NCK1P16333 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
NCK1P16333 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NCK1P16333 AC008556.1-201ENST00000610908 2040 ntBASIC17.52■□□□□ 0.39
NCK1P16333 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NCK1P16333 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
NCK1P16333 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.52■□□□□ 0.39
NCK1P16333 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.52■□□□□ 0.39
NCK1P16333 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
NCK1P16333 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCK1P16333 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCK1P16333 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCK1P16333 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCK1P16333 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.51■□□□□ 0.39
NCK1P16333 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCK1P16333 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCK1P16333 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCK1P16333 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCK1P16333 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCK1P16333 KRT8P11-201ENST00000409686 1436 ntBASIC17.51■□□□□ 0.39
NCK1P16333 KRT8P45-201ENST00000414328 1447 ntBASIC17.51■□□□□ 0.39
NCK1P16333 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.51■□□□□ 0.39
NCK1P16333 POU5F1P3-201ENST00000428824 1078 ntBASIC17.51■□□□□ 0.39
NCK1P16333 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NCK1P16333 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.51■□□□□ 0.39
NCK1P16333 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.51■□□□□ 0.39
NCK1P16333 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCK1P16333 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
NCK1P16333 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.51■□□□□ 0.39
NCK1P16333 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCK1P16333 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCK1P16333 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCK1P16333 AL137784.2-201ENST00000607332 1000 ntBASIC17.51■□□□□ 0.39
NCK1P16333 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCK1P16333 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCK1P16333 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.51■□□□□ 0.39
NCK1P16333 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.51■□□□□ 0.39
NCK1P16333 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCK1P16333 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCK1P16333 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCK1P16333 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCK1P16333 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCK1P16333 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCK1P16333 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.5■□□□□ 0.39
NCK1P16333 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NCK1P16333 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCK1P16333 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.5■□□□□ 0.39
NCK1P16333 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.5■□□□□ 0.39
NCK1P16333 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.5■□□□□ 0.39
NCK1P16333 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
NCK1P16333 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCK1P16333 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCK1P16333 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCK1P16333 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCK1P16333 AC009053.2-201ENST00000563701 2365 ntBASIC17.5■□□□□ 0.39
NCK1P16333 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.5■□□□□ 0.39
NCK1P16333 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCK1P16333 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCK1P16333 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.5■□□□□ 0.39
NCK1P16333 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NCK1P16333 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.5■□□□□ 0.39
NCK1P16333 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.5■□□□□ 0.39
NCK1P16333 Z85996.1-201ENST00000494644 937 ntBASIC17.5■□□□□ 0.39
NCK1P16333 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.5■□□□□ 0.39
NCK1P16333 PRKY-204ENST00000533551 1019 ntBASIC17.5■□□□□ 0.39
NCK1P16333 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCK1P16333 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCK1P16333 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCK1P16333 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCK1P16333 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NCK1P16333 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.5■□□□□ 0.39
NCK1P16333 PCDHA12-202ENST00000613593 2588 ntBASIC17.5■□□□□ 0.39
NCK1P16333 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCK1P16333 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.5■□□□□ 0.39
NCK1P16333 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCK1P16333 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCK1P16333 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCK1P16333 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.5■□□□□ 0.39
NCK1P16333 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCK1P16333 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.49■□□□□ 0.39
NCK1P16333 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCK1P16333 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCK1P16333 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCK1P16333 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NCK1P16333 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NCK1P16333 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCK1P16333 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCK1P16333 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCK1P16333 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCK1P16333 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.49■□□□□ 0.39
NCK1P16333 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCK1P16333 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCK1P16333 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCK1P16333 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCK1P16333 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.49■□□□□ 0.39
NCK1P16333 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.49■□□□□ 0.39
NCK1P16333 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.49■□□□□ 0.39
NCK1P16333 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.49■□□□□ 0.39
NCK1P16333 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NCK1P16333 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms