Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.67■□□□□ 0.26
HLA-DPB1P04440 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HLA-DPB1P04440 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DPB1P04440 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
HLA-DPB1P04440 AC134043.2-201ENST00000624206 2238 ntBASIC16.67■□□□□ 0.26
HLA-DPB1P04440 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPB1P04440 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
HLA-DPB1P04440 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HLA-DPB1P04440 AC139713.2-201ENST00000641328 2723 ntBASIC16.67■□□□□ 0.26
HLA-DPB1P04440 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HLA-DPB1P04440 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPB1P04440 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
HLA-DPB1P04440 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 AC124016.1-201ENST00000609552 612 ntBASIC16.66■□□□□ 0.26
HLA-DPB1P04440 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DPB1P04440 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 PRORSD1P-201ENST00000295112 541 ntBASIC16.65■□□□□ 0.26
HLA-DPB1P04440 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 TSPY21P-201ENST00000433481 731 ntBASIC16.65■□□□□ 0.26
HLA-DPB1P04440 TUBB8P6-201ENST00000436895 1288 ntBASIC16.65■□□□□ 0.26
HLA-DPB1P04440 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 RPPH1-201ENST00000516869 333 ntBASIC16.65■□□□□ 0.26
HLA-DPB1P04440 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.65■□□□□ 0.26
HLA-DPB1P04440 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
HLA-DPB1P04440 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 SIRPAP1-201ENST00000448467 1770 ntBASIC16.64■□□□□ 0.25
HLA-DPB1P04440 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 KRT18P16-201ENST00000510337 1294 ntBASIC16.64■□□□□ 0.25
HLA-DPB1P04440 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.64■□□□□ 0.25
HLA-DPB1P04440 AC004264.1-201ENST00000608354 794 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms