Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.48■□□□□ 0.39
MT-ND1P03886 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MT-ND1P03886 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.48■□□□□ 0.39
MT-ND1P03886 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
MT-ND1P03886 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.48■□□□□ 0.39
MT-ND1P03886 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.48■□□□□ 0.39
MT-ND1P03886 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.48■□□□□ 0.39
MT-ND1P03886 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.48■□□□□ 0.39
MT-ND1P03886 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MT-ND1P03886 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.48■□□□□ 0.39
MT-ND1P03886 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.48■□□□□ 0.39
MT-ND1P03886 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND1P03886 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND1P03886 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND1P03886 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND1P03886 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
MT-ND1P03886 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND1P03886 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.47■□□□□ 0.39
MT-ND1P03886 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MT-ND1P03886 AL355802.2-201ENST00000402069 882 ntBASIC17.47■□□□□ 0.39
MT-ND1P03886 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND1P03886 PRKY-204ENST00000533551 1019 ntBASIC17.47■□□□□ 0.39
MT-ND1P03886 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND1P03886 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND1P03886 AC093677.2-201ENST00000600169 1863 ntBASIC17.47■□□□□ 0.39
MT-ND1P03886 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND1P03886 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND1P03886 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND1P03886 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND1P03886 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND1P03886 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND1P03886 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND1P03886 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
MT-ND1P03886 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND1P03886 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND1P03886 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND1P03886 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND1P03886 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND1P03886 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
MT-ND1P03886 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND1P03886 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.46■□□□□ 0.39
MT-ND1P03886 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
MT-ND1P03886 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND1P03886 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND1P03886 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND1P03886 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND1P03886 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND1P03886 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND1P03886 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND1P03886 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND1P03886 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND1P03886 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND1P03886 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND1P03886 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.46■□□□□ 0.39
MT-ND1P03886 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND1P03886 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.46■□□□□ 0.39
MT-ND1P03886 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.46■□□□□ 0.39
MT-ND1P03886 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.46■□□□□ 0.39
MT-ND1P03886 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.46■□□□□ 0.39
MT-ND1P03886 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.46■□□□□ 0.39
MT-ND1P03886 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND1P03886 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND1P03886 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.46■□□□□ 0.39
MT-ND1P03886 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND1P03886 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
MT-ND1P03886 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.46■□□□□ 0.39
MT-ND1P03886 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
MT-ND1P03886 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND1P03886 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
MT-ND1P03886 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
MT-ND1P03886 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
MT-ND1P03886 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
MT-ND1P03886 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND1P03886 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND1P03886 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND1P03886 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
MT-ND1P03886 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND1P03886 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND1P03886 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms