Protein–RNA interactions for Protein: P00736

C1R, Complement C1r subcomponent, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1RP00736 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
C1RP00736 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C1RP00736 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
C1RP00736 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C1RP00736 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
C1RP00736 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
C1RP00736 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
C1RP00736 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.47■□□□□ 0.71
C1RP00736 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
C1RP00736 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C1RP00736 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C1RP00736 POM121L3P-201ENST00000419331 1163 ntBASIC19.47■□□□□ 0.71
C1RP00736 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.47■□□□□ 0.71
C1RP00736 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.47■□□□□ 0.71
C1RP00736 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C1RP00736 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.47■□□□□ 0.71
C1RP00736 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
C1RP00736 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C1RP00736 AL121912.1-201ENST00000603683 238 ntBASIC19.47■□□□□ 0.71
C1RP00736 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
C1RP00736 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
C1RP00736 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.47■□□□□ 0.71
C1RP00736 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C1RP00736 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C1RP00736 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.47■□□□□ 0.71
C1RP00736 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
C1RP00736 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
C1RP00736 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.46■□□□□ 0.71
C1RP00736 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.46■□□□□ 0.71
C1RP00736 AL353692.3-201ENST00000407031 1396 ntBASIC19.46■□□□□ 0.71
C1RP00736 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C1RP00736 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.46■□□□□ 0.71
C1RP00736 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.46■□□□□ 0.71
C1RP00736 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
C1RP00736 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C1RP00736 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C1RP00736 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C1RP00736 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C1RP00736 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C1RP00736 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C1RP00736 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
C1RP00736 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
C1RP00736 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.46■□□□□ 0.71
C1RP00736 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.46■□□□□ 0.71
C1RP00736 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.46■□□□□ 0.71
C1RP00736 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C1RP00736 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
C1RP00736 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.46■□□□□ 0.71
C1RP00736 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
C1RP00736 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C1RP00736 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C1RP00736 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
C1RP00736 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C1RP00736 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
C1RP00736 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
C1RP00736 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C1RP00736 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C1RP00736 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C1RP00736 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.46■□□□□ 0.71
C1RP00736 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.46■□□□□ 0.71
C1RP00736 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C1RP00736 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C1RP00736 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C1RP00736 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
C1RP00736 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
C1RP00736 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C1RP00736 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C1RP00736 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.45■□□□□ 0.7
C1RP00736 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
C1RP00736 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C1RP00736 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C1RP00736 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.45■□□□□ 0.7
C1RP00736 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.45■□□□□ 0.7
C1RP00736 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.45■□□□□ 0.7
C1RP00736 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.45■□□□□ 0.7
C1RP00736 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.45■□□□□ 0.7
C1RP00736 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.45■□□□□ 0.7
C1RP00736 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.45■□□□□ 0.7
C1RP00736 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.45■□□□□ 0.7
C1RP00736 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C1RP00736 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.45■□□□□ 0.7
C1RP00736 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C1RP00736 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C1RP00736 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C1RP00736 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.45■□□□□ 0.7
C1RP00736 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C1RP00736 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.44■□□□□ 0.7
C1RP00736 Z98044.1-201ENST00000632503 1764 ntBASIC19.44■□□□□ 0.7
C1RP00736 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
C1RP00736 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
C1RP00736 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.44■□□□□ 0.7
C1RP00736 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C1RP00736 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
C1RP00736 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C1RP00736 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
C1RP00736 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
C1RP00736 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.44■□□□□ 0.7
C1RP00736 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
C1RP00736 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C1RP00736 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms