Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL3O95164 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBL3O95164 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL3O95164 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL3O95164 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL3O95164 AC067852.2-201ENST00000590513 2313 ntBASIC16.63■□□□□ 0.25
UBL3O95164 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL3O95164 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBL3O95164 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
UBL3O95164 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL3O95164 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL3O95164 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL3O95164 CRYGFP-201ENST00000418459 633 ntBASIC16.63■□□□□ 0.25
UBL3O95164 MFAP1P1-201ENST00000442257 1255 ntBASIC16.63■□□□□ 0.25
UBL3O95164 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.63■□□□□ 0.25
UBL3O95164 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBL3O95164 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
UBL3O95164 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.63■□□□□ 0.25
UBL3O95164 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL3O95164 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.63■□□□□ 0.25
UBL3O95164 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
UBL3O95164 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBL3O95164 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.63■□□□□ 0.25
UBL3O95164 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBL3O95164 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL3O95164 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL3O95164 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.63■□□□□ 0.25
UBL3O95164 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.63■□□□□ 0.25
UBL3O95164 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL3O95164 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL3O95164 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL3O95164 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
UBL3O95164 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL3O95164 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBL3O95164 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.62■□□□□ 0.25
UBL3O95164 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.62■□□□□ 0.25
UBL3O95164 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.62■□□□□ 0.25
UBL3O95164 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
UBL3O95164 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.62■□□□□ 0.25
UBL3O95164 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.62■□□□□ 0.25
UBL3O95164 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
UBL3O95164 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
UBL3O95164 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
UBL3O95164 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
UBL3O95164 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.62■□□□□ 0.25
UBL3O95164 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
UBL3O95164 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.62■□□□□ 0.25
UBL3O95164 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
UBL3O95164 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBL3O95164 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBL3O95164 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
UBL3O95164 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.61■□□□□ 0.25
UBL3O95164 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
UBL3O95164 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
UBL3O95164 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.61■□□□□ 0.25
UBL3O95164 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBL3O95164 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBL3O95164 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
UBL3O95164 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBL3O95164 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBL3O95164 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.61■□□□□ 0.25
UBL3O95164 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.61■□□□□ 0.25
UBL3O95164 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.61■□□□□ 0.25
UBL3O95164 AP000525.1-201ENST00000608286 694 ntBASIC16.61■□□□□ 0.25
UBL3O95164 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBL3O95164 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBL3O95164 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBL3O95164 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBL3O95164 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.61■□□□□ 0.25
UBL3O95164 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBL3O95164 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBL3O95164 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.6■□□□□ 0.25
UBL3O95164 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
UBL3O95164 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBL3O95164 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.6■□□□□ 0.25
UBL3O95164 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBL3O95164 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
UBL3O95164 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms