Protein–RNA interactions for Protein: O75387

SLC43A1, Large neutral amino acids transporter small subunit 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1O75387 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC43A1O75387 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC43A1O75387 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC43A1O75387 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC43A1O75387 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC43A1O75387 AL355075.4-201ENST00000554988 638 ntBASIC16.81■□□□□ 0.28
SLC43A1O75387 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC43A1O75387 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC43A1O75387 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC43A1O75387 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC43A1O75387 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC43A1O75387 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SLC43A1O75387 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC43A1O75387 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC43A1O75387 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SLC43A1O75387 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC43A1O75387 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC43A1O75387 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC43A1O75387 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC43A1O75387 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC43A1O75387 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC43A1O75387 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC43A1O75387 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
SLC43A1O75387 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC43A1O75387 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC43A1O75387 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
SLC43A1O75387 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC43A1O75387 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC43A1O75387 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC43A1O75387 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC43A1O75387 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC43A1O75387 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC43A1O75387 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC43A1O75387 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC43A1O75387 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC43A1O75387 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC43A1O75387 AP005242.2-201ENST00000580065 1175 ntBASIC16.8■□□□□ 0.28
SLC43A1O75387 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC43A1O75387 AP000525.1-201ENST00000608286 694 ntBASIC16.8■□□□□ 0.28
SLC43A1O75387 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC43A1O75387 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC43A1O75387 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SLC43A1O75387 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC43A1O75387 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC43A1O75387 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC43A1O75387 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SLC43A1O75387 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC43A1O75387 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SLC43A1O75387 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC43A1O75387 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLC43A1O75387 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SLC43A1O75387 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC43A1O75387 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC43A1O75387 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.8■□□□□ 0.28
SLC43A1O75387 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC43A1O75387 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC43A1O75387 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC43A1O75387 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC43A1O75387 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC43A1O75387 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC43A1O75387 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SLC43A1O75387 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC43A1O75387 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SLC43A1O75387 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC43A1O75387 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC43A1O75387 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC43A1O75387 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC43A1O75387 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC43A1O75387 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC43A1O75387 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC43A1O75387 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SLC43A1O75387 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC43A1O75387 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC43A1O75387 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC43A1O75387 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SLC43A1O75387 MIR1238-201ENST00000408483 83 ntBASIC16.78■□□□□ 0.28
SLC43A1O75387 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms