Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SYNCRIPO60506 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCRIPO60506 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCRIPO60506 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.91■□□□□ 0.62
SYNCRIPO60506 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCRIPO60506 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.91■□□□□ 0.62
SYNCRIPO60506 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SYNCRIPO60506 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNCRIPO60506 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SYNCRIPO60506 AL157888.1-201ENST00000631930 593 ntBASIC18.91■□□□□ 0.62
SYNCRIPO60506 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCRIPO60506 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCRIPO60506 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SYNCRIPO60506 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCRIPO60506 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCRIPO60506 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCRIPO60506 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCRIPO60506 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCRIPO60506 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNCRIPO60506 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.9■□□□□ 0.62
SYNCRIPO60506 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SYNCRIPO60506 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNCRIPO60506 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SYNCRIPO60506 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.9■□□□□ 0.62
SYNCRIPO60506 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNCRIPO60506 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SYNCRIPO60506 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.9■□□□□ 0.62
SYNCRIPO60506 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
SYNCRIPO60506 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNCRIPO60506 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SYNCRIPO60506 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNCRIPO60506 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNCRIPO60506 ATP5G2P1-201ENST00000433580 426 ntBASIC18.9■□□□□ 0.62
SYNCRIPO60506 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.9■□□□□ 0.62
SYNCRIPO60506 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNCRIPO60506 MIR3917-201ENST00000580971 93 ntBASIC18.9■□□□□ 0.62
SYNCRIPO60506 AC011498.5-201ENST00000592027 486 ntBASIC18.9■□□□□ 0.62
SYNCRIPO60506 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNCRIPO60506 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.9■□□□□ 0.62
SYNCRIPO60506 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNCRIPO60506 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNCRIPO60506 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNCRIPO60506 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNCRIPO60506 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNCRIPO60506 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
SYNCRIPO60506 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.89■□□□□ 0.61
SYNCRIPO60506 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNCRIPO60506 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
SYNCRIPO60506 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.89■□□□□ 0.61
SYNCRIPO60506 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNCRIPO60506 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.89■□□□□ 0.61
SYNCRIPO60506 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SYNCRIPO60506 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.89■□□□□ 0.61
SYNCRIPO60506 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SYNCRIPO60506 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.89■□□□□ 0.61
SYNCRIPO60506 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
SYNCRIPO60506 BX276092.5-203ENST00000456199 560 ntBASIC18.89■□□□□ 0.61
SYNCRIPO60506 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.89■□□□□ 0.61
SYNCRIPO60506 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.89■□□□□ 0.61
SYNCRIPO60506 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.89■□□□□ 0.61
SYNCRIPO60506 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.89■□□□□ 0.61
SYNCRIPO60506 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.89■□□□□ 0.61
SYNCRIPO60506 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
SYNCRIPO60506 CLEC4GP1-201ENST00000596555 870 ntBASIC18.89■□□□□ 0.61
SYNCRIPO60506 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.89■□□□□ 0.61
SYNCRIPO60506 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SYNCRIPO60506 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
SYNCRIPO60506 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNCRIPO60506 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.89■□□□□ 0.61
SYNCRIPO60506 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SYNCRIPO60506 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.89■□□□□ 0.61
SYNCRIPO60506 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNCRIPO60506 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SYNCRIPO60506 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.89■□□□□ 0.61
SYNCRIPO60506 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNCRIPO60506 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.89■□□□□ 0.61
SYNCRIPO60506 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SYNCRIPO60506 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNCRIPO60506 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNCRIPO60506 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNCRIPO60506 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNCRIPO60506 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.88■□□□□ 0.61
SYNCRIPO60506 IRX1P1-201ENST00000438849 1838 ntBASIC18.88■□□□□ 0.61
SYNCRIPO60506 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYNCRIPO60506 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNCRIPO60506 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SYNCRIPO60506 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNCRIPO60506 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYNCRIPO60506 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNCRIPO60506 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYNCRIPO60506 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SYNCRIPO60506 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
SYNCRIPO60506 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYNCRIPO60506 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.88■□□□□ 0.61
SYNCRIPO60506 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SYNCRIPO60506 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNCRIPO60506 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.88■□□□□ 0.61
SYNCRIPO60506 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYNCRIPO60506 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SYNCRIPO60506 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms