Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AL121906.2-201ENST00000621597 723 ntBASIC18.25■□□□□ 0.51
SNX3O60493 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNX3O60493 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX3O60493 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SNX3O60493 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX3O60493 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SNX3O60493 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX3O60493 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX3O60493 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX3O60493 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNX3O60493 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SNX3O60493 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX3O60493 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX3O60493 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX3O60493 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SNX3O60493 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNX3O60493 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.24■□□□□ 0.51
SNX3O60493 BCL2-203ENST00000589955 5011 ntBASIC18.24■□□□□ 0.51
SNX3O60493 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNX3O60493 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SNX3O60493 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SNX3O60493 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.24■□□□□ 0.51
SNX3O60493 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.24■□□□□ 0.51
SNX3O60493 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.24■□□□□ 0.51
SNX3O60493 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.24■□□□□ 0.51
SNX3O60493 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SNX3O60493 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SNX3O60493 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.24■□□□□ 0.51
SNX3O60493 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNX3O60493 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
SNX3O60493 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SNX3O60493 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNX3O60493 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.24■□□□□ 0.51
SNX3O60493 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNX3O60493 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNX3O60493 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SNX3O60493 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SNX3O60493 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNX3O60493 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
SNX3O60493 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNX3O60493 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNX3O60493 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNX3O60493 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNX3O60493 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.23■□□□□ 0.51
SNX3O60493 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.23■□□□□ 0.51
SNX3O60493 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
SNX3O60493 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
SNX3O60493 MYLKP1-201ENST00000509077 1580 ntBASIC18.23■□□□□ 0.51
SNX3O60493 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SNX3O60493 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.23■□□□□ 0.51
SNX3O60493 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNX3O60493 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.23■□□□□ 0.51
SNX3O60493 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SNX3O60493 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SNX3O60493 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNX3O60493 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.23■□□□□ 0.51
SNX3O60493 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNX3O60493 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNX3O60493 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNX3O60493 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SNX3O60493 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNX3O60493 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SNX3O60493 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNX3O60493 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNX3O60493 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
SNX3O60493 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.22■□□□□ 0.51
SNX3O60493 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX3O60493 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX3O60493 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX3O60493 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNX3O60493 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX3O60493 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX3O60493 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.22■□□□□ 0.51
SNX3O60493 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX3O60493 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNX3O60493 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
SNX3O60493 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX3O60493 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.22■□□□□ 0.51
SNX3O60493 LSM12P1-201ENST00000411836 588 ntBASIC18.22■□□□□ 0.51
SNX3O60493 AL512625.2-201ENST00000417533 625 ntBASIC18.22■□□□□ 0.51
SNX3O60493 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.22■□□□□ 0.51
SNX3O60493 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNX3O60493 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX3O60493 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX3O60493 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.22■□□□□ 0.51
SNX3O60493 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
SNX3O60493 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
SNX3O60493 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SNX3O60493 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX3O60493 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX3O60493 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.22■□□□□ 0.51
SNX3O60493 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.22■□□□□ 0.51
SNX3O60493 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX3O60493 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.22■□□□□ 0.51
SNX3O60493 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SNX3O60493 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.21■□□□□ 0.51
SNX3O60493 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.21■□□□□ 0.51
SNX3O60493 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX3O60493 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SNX3O60493 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms