Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSSCA1O60232 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SSSCA1O60232 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSSCA1O60232 KRT18P5-201ENST00000436075 1291 ntBASIC15.12■□□□□ 0.01
SSSCA1O60232 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC15.12■□□□□ 0.01
SSSCA1O60232 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.12■□□□□ 0.01
SSSCA1O60232 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.12■□□□□ 0.01
SSSCA1O60232 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SSSCA1O60232 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSSCA1O60232 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSSCA1O60232 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
SSSCA1O60232 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSSCA1O60232 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSSCA1O60232 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSSCA1O60232 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSSCA1O60232 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
SSSCA1O60232 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSSCA1O60232 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSSCA1O60232 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSSCA1O60232 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SSSCA1O60232 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSSCA1O60232 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSSCA1O60232 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSSCA1O60232 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSSCA1O60232 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSSCA1O60232 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
SSSCA1O60232 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSSCA1O60232 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSSCA1O60232 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSSCA1O60232 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSSCA1O60232 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSSCA1O60232 PCDHA12-202ENST00000613593 2588 ntBASIC15.11■□□□□ 0.01
SSSCA1O60232 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSSCA1O60232 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.11■□□□□ 0.01
SSSCA1O60232 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSSCA1O60232 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSSCA1O60232 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.11■□□□□ 0.01
SSSCA1O60232 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.11■□□□□ 0.01
SSSCA1O60232 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.11■□□□□ 0.01
SSSCA1O60232 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.11■□□□□ 0.01
SSSCA1O60232 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSSCA1O60232 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.11■□□□□ 0.01
SSSCA1O60232 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.11■□□□□ 0.01
SSSCA1O60232 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.11■□□□□ 0.01
SSSCA1O60232 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.11■□□□□ 0.01
SSSCA1O60232 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
SSSCA1O60232 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SSSCA1O60232 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.11■□□□□ 0.01
SSSCA1O60232 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SSSCA1O60232 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSSCA1O60232 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSSCA1O60232 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.11■□□□□ 0.01
SSSCA1O60232 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSSCA1O60232 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSSCA1O60232 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSSCA1O60232 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.1■□□□□ 0.01
SSSCA1O60232 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
SSSCA1O60232 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.1■□□□□ 0.01
SSSCA1O60232 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SSSCA1O60232 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.1■□□□□ 0.01
SSSCA1O60232 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SSSCA1O60232 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.1■□□□□ 0.01
SSSCA1O60232 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SSSCA1O60232 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSSCA1O60232 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SSSCA1O60232 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.1■□□□□ 0.01
SSSCA1O60232 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSSCA1O60232 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.1■□□□□ 0.01
SSSCA1O60232 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.1■□□□□ 0.01
SSSCA1O60232 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.1■□□□□ 0.01
SSSCA1O60232 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.1■□□□□ 0.01
SSSCA1O60232 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.1■□□□□ 0.01
SSSCA1O60232 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSSCA1O60232 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
SSSCA1O60232 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.1■□□□□ 0.01
SSSCA1O60232 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSSCA1O60232 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.1■□□□□ 0.01
SSSCA1O60232 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSSCA1O60232 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.1■□□□□ 0.01
SSSCA1O60232 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.1■□□□□ 0.01
SSSCA1O60232 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SSSCA1O60232 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSSCA1O60232 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SSSCA1O60232 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
SSSCA1O60232 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SSSCA1O60232 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.1■□□□□ 0.01
SSSCA1O60232 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SSSCA1O60232 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SSSCA1O60232 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SSSCA1O60232 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SSSCA1O60232 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SSSCA1O60232 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SSSCA1O60232 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SSSCA1O60232 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.09■□□□□ 0.01
SSSCA1O60232 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SSSCA1O60232 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SSSCA1O60232 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SSSCA1O60232 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SSSCA1O60232 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SSSCA1O60232 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms