Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
EXTL3O43909 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EXTL3O43909 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.07■□□□□ 0.8
EXTL3O43909 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EXTL3O43909 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.07■□□□□ 0.8
EXTL3O43909 SPDYE15P-201ENST00000424157 909 ntBASIC20.07■□□□□ 0.8
EXTL3O43909 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EXTL3O43909 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.07■□□□□ 0.8
EXTL3O43909 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EXTL3O43909 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.07■□□□□ 0.8
EXTL3O43909 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.07■□□□□ 0.8
EXTL3O43909 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
EXTL3O43909 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EXTL3O43909 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.07■□□□□ 0.8
EXTL3O43909 AC005082.1-201ENST00000413042 2259 ntBASIC20.07■□□□□ 0.8
EXTL3O43909 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
EXTL3O43909 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EXTL3O43909 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EXTL3O43909 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EXTL3O43909 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EXTL3O43909 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EXTL3O43909 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
EXTL3O43909 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
EXTL3O43909 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
EXTL3O43909 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EXTL3O43909 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EXTL3O43909 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.06■□□□□ 0.8
EXTL3O43909 AC009102.3-201ENST00000623118 1491 ntBASIC20.06■□□□□ 0.8
EXTL3O43909 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
EXTL3O43909 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EXTL3O43909 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EXTL3O43909 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.06■□□□□ 0.8
EXTL3O43909 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.06■□□□□ 0.8
EXTL3O43909 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
EXTL3O43909 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EXTL3O43909 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
EXTL3O43909 FAM8A6P-201ENST00000407496 1135 ntBASIC20.06■□□□□ 0.8
EXTL3O43909 AC092647.4-201ENST00000457211 535 ntBASIC20.06■□□□□ 0.8
EXTL3O43909 AC022616.7-201ENST00000525383 220 ntBASIC20.06■□□□□ 0.8
EXTL3O43909 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.06■□□□□ 0.8
EXTL3O43909 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
EXTL3O43909 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
EXTL3O43909 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
EXTL3O43909 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
EXTL3O43909 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
EXTL3O43909 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EXTL3O43909 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.06■□□□□ 0.8
EXTL3O43909 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
EXTL3O43909 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
EXTL3O43909 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXTL3O43909 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXTL3O43909 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXTL3O43909 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXTL3O43909 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EXTL3O43909 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.05■□□□□ 0.8
EXTL3O43909 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.05■□□□□ 0.8
EXTL3O43909 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXTL3O43909 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.05■□□□□ 0.8
EXTL3O43909 KRT18P38-201ENST00000449496 1282 ntBASIC20.05■□□□□ 0.8
EXTL3O43909 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXTL3O43909 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.05■□□□□ 0.8
EXTL3O43909 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.05■□□□□ 0.8
EXTL3O43909 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXTL3O43909 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
EXTL3O43909 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.05■□□□□ 0.8
EXTL3O43909 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EXTL3O43909 AL020996.1-203ENST00000536896 2307 ntBASIC20.05■□□□□ 0.8
EXTL3O43909 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.05■□□□□ 0.8
EXTL3O43909 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.05■□□□□ 0.8
EXTL3O43909 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXTL3O43909 SDHAP2-201ENST00000455183 2001 ntBASIC20.05■□□□□ 0.8
EXTL3O43909 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.05■□□□□ 0.8
EXTL3O43909 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXTL3O43909 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
EXTL3O43909 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXTL3O43909 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXTL3O43909 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EXTL3O43909 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXTL3O43909 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EXTL3O43909 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EXTL3O43909 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EXTL3O43909 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
EXTL3O43909 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EXTL3O43909 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EXTL3O43909 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.04■□□□□ 0.8
EXTL3O43909 AL359075.1-203ENST00000462729 1002 ntBASIC20.04■□□□□ 0.8
EXTL3O43909 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.04■□□□□ 0.8
EXTL3O43909 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.04■□□□□ 0.8
EXTL3O43909 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.04■□□□□ 0.8
EXTL3O43909 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
EXTL3O43909 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EXTL3O43909 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EXTL3O43909 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EXTL3O43909 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EXTL3O43909 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EXTL3O43909 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
EXTL3O43909 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EXTL3O43909 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXTL3O43909 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXTL3O43909 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms