Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
SNAI2O43623 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.86□□□□□ -0.19
SNAI2O43623 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
SNAI2O43623 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
SNAI2O43623 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SNAI2O43623 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SNAI2O43623 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.86□□□□□ -0.19
SNAI2O43623 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SNAI2O43623 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNAI2O43623 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SNAI2O43623 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SNAI2O43623 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SNAI2O43623 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SNAI2O43623 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.85□□□□□ -0.19
SNAI2O43623 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNAI2O43623 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.85□□□□□ -0.19
SNAI2O43623 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNAI2O43623 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNAI2O43623 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.85□□□□□ -0.19
SNAI2O43623 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.85□□□□□ -0.19
SNAI2O43623 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
SNAI2O43623 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNAI2O43623 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNAI2O43623 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SNAI2O43623 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.85□□□□□ -0.19
SNAI2O43623 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC13.85□□□□□ -0.19
SNAI2O43623 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.85□□□□□ -0.19
SNAI2O43623 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNAI2O43623 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.85□□□□□ -0.19
SNAI2O43623 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
SNAI2O43623 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SNAI2O43623 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNAI2O43623 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SNAI2O43623 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.85□□□□□ -0.19
SNAI2O43623 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.85□□□□□ -0.19
SNAI2O43623 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.85□□□□□ -0.19
SNAI2O43623 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNAI2O43623 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNAI2O43623 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNAI2O43623 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.85□□□□□ -0.19
SNAI2O43623 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
SNAI2O43623 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNAI2O43623 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
SNAI2O43623 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SNAI2O43623 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNAI2O43623 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNAI2O43623 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SNAI2O43623 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNAI2O43623 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.84□□□□□ -0.19
SNAI2O43623 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNAI2O43623 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNAI2O43623 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNAI2O43623 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNAI2O43623 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNAI2O43623 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.84□□□□□ -0.19
SNAI2O43623 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SNAI2O43623 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNAI2O43623 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNAI2O43623 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.84□□□□□ -0.19
SNAI2O43623 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.84□□□□□ -0.19
SNAI2O43623 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNAI2O43623 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.84□□□□□ -0.19
SNAI2O43623 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNAI2O43623 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNAI2O43623 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNAI2O43623 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNAI2O43623 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC13.84□□□□□ -0.19
SNAI2O43623 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
SNAI2O43623 AF201337.1-201ENST00000520239 748 ntBASIC13.84□□□□□ -0.19
SNAI2O43623 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.84□□□□□ -0.19
SNAI2O43623 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNAI2O43623 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.84□□□□□ -0.19
SNAI2O43623 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.84□□□□□ -0.19
SNAI2O43623 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SNAI2O43623 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNAI2O43623 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SNAI2O43623 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNAI2O43623 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNAI2O43623 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.84□□□□□ -0.19
SNAI2O43623 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNAI2O43623 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.84□□□□□ -0.19
SNAI2O43623 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC13.84□□□□□ -0.19
SNAI2O43623 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC13.84□□□□□ -0.19
SNAI2O43623 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms