Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AL121829.2-201ENST00000620908 328 ntBASIC12.69□□□□□ -0.38
NDUFA1O15239 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
NDUFA1O15239 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFA1O15239 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFA1O15239 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFA1O15239 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
NDUFA1O15239 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFA1O15239 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFA1O15239 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.69□□□□□ -0.38
NDUFA1O15239 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFA1O15239 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFA1O15239 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFA1O15239 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
NDUFA1O15239 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFA1O15239 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFA1O15239 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFA1O15239 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
NDUFA1O15239 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFA1O15239 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC12.68□□□□□ -0.38
NDUFA1O15239 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFA1O15239 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFA1O15239 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFA1O15239 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
NDUFA1O15239 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
NDUFA1O15239 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFA1O15239 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
NDUFA1O15239 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC12.68□□□□□ -0.38
NDUFA1O15239 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC12.68□□□□□ -0.38
NDUFA1O15239 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFA1O15239 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFA1O15239 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC12.68□□□□□ -0.38
NDUFA1O15239 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC12.68□□□□□ -0.38
NDUFA1O15239 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFA1O15239 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC12.68□□□□□ -0.38
NDUFA1O15239 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
NDUFA1O15239 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFA1O15239 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFA1O15239 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFA1O15239 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC12.68□□□□□ -0.38
NDUFA1O15239 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFA1O15239 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC12.68□□□□□ -0.38
NDUFA1O15239 NCF1B-203ENST00000435988 1254 ntBASIC12.68□□□□□ -0.38
NDUFA1O15239 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC12.68□□□□□ -0.38
NDUFA1O15239 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC12.68□□□□□ -0.38
NDUFA1O15239 AL138781.1-201ENST00000566567 1274 ntBASIC12.68□□□□□ -0.38
NDUFA1O15239 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC12.68□□□□□ -0.38
NDUFA1O15239 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC12.68□□□□□ -0.38
NDUFA1O15239 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
NDUFA1O15239 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC12.68□□□□□ -0.38
NDUFA1O15239 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC12.68□□□□□ -0.38
NDUFA1O15239 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFA1O15239 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFA1O15239 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFA1O15239 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFA1O15239 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFA1O15239 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFA1O15239 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC12.68□□□□□ -0.38
NDUFA1O15239 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC12.68□□□□□ -0.38
NDUFA1O15239 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
NDUFA1O15239 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFA1O15239 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFA1O15239 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NDUFA1O15239 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NDUFA1O15239 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NDUFA1O15239 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
NDUFA1O15239 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
NDUFA1O15239 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
NDUFA1O15239 AC138028.4-201ENST00000564984 1845 ntBASIC12.67□□□□□ -0.38
NDUFA1O15239 AC135776.1-201ENST00000319817 2481 ntBASIC12.67□□□□□ -0.38
NDUFA1O15239 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
NDUFA1O15239 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NDUFA1O15239 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NDUFA1O15239 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
NDUFA1O15239 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NDUFA1O15239 AC099398.1-201ENST00000567919 2776 ntBASIC12.67□□□□□ -0.38
NDUFA1O15239 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
NDUFA1O15239 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NDUFA1O15239 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
NDUFA1O15239 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC12.67□□□□□ -0.38
NDUFA1O15239 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
NDUFA1O15239 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
NDUFA1O15239 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NDUFA1O15239 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NDUFA1O15239 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NDUFA1O15239 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NDUFA1O15239 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NDUFA1O15239 MIR935-201ENST00000401179 91 ntBASIC12.67□□□□□ -0.38
NDUFA1O15239 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
NDUFA1O15239 KRT18P16-201ENST00000510337 1294 ntBASIC12.67□□□□□ -0.38
NDUFA1O15239 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NDUFA1O15239 PRKY-204ENST00000533551 1019 ntBASIC12.67□□□□□ -0.38
NDUFA1O15239 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NDUFA1O15239 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC12.67□□□□□ -0.38
NDUFA1O15239 SOX15-203ENST00000570788 1093 ntBASIC12.67□□□□□ -0.38
NDUFA1O15239 AC120498.8-201ENST00000614275 531 ntBASIC12.67□□□□□ -0.38
NDUFA1O15239 MYC-208ENST00000641036 567 ntBASIC12.67□□□□□ -0.38
NDUFA1O15239 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.67□□□□□ -0.38
NDUFA1O15239 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
NDUFA1O15239 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC12.67□□□□□ -0.38
NDUFA1O15239 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms