Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
SMAD9O15198 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.82■□□□□ 0.28
SMAD9O15198 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SMAD9O15198 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD9O15198 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD9O15198 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD9O15198 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD9O15198 BCL2-203ENST00000589955 5011 ntBASIC16.82■□□□□ 0.28
SMAD9O15198 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.82■□□□□ 0.28
SMAD9O15198 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.82■□□□□ 0.28
SMAD9O15198 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD9O15198 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD9O15198 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD9O15198 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD9O15198 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.82■□□□□ 0.28
SMAD9O15198 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD9O15198 RCC2P3-201ENST00000418112 1537 ntBASIC16.81■□□□□ 0.28
SMAD9O15198 KRT8P32-201ENST00000512863 1461 ntBASIC16.81■□□□□ 0.28
SMAD9O15198 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD9O15198 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SMAD9O15198 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SMAD9O15198 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD9O15198 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD9O15198 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.81■□□□□ 0.28
SMAD9O15198 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SMAD9O15198 AL023284.2-201ENST00000405850 579 ntBASIC16.81■□□□□ 0.28
SMAD9O15198 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD9O15198 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SMAD9O15198 AC005363.2-201ENST00000618631 242 ntBASIC16.81■□□□□ 0.28
SMAD9O15198 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SMAD9O15198 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD9O15198 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD9O15198 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.81■□□□□ 0.28
SMAD9O15198 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.81■□□□□ 0.28
SMAD9O15198 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.81■□□□□ 0.28
SMAD9O15198 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD9O15198 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD9O15198 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SMAD9O15198 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
SMAD9O15198 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.81■□□□□ 0.28
SMAD9O15198 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SMAD9O15198 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMAD9O15198 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SMAD9O15198 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD9O15198 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD9O15198 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SMAD9O15198 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD9O15198 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SMAD9O15198 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD9O15198 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.8■□□□□ 0.28
SMAD9O15198 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD9O15198 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD9O15198 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SMAD9O15198 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.8■□□□□ 0.28
SMAD9O15198 AC113347.1-201ENST00000413321 391 ntBASIC16.8■□□□□ 0.28
SMAD9O15198 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.8■□□□□ 0.28
SMAD9O15198 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.8■□□□□ 0.28
SMAD9O15198 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD9O15198 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.8■□□□□ 0.28
SMAD9O15198 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD9O15198 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD9O15198 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.8■□□□□ 0.28
SMAD9O15198 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD9O15198 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.8■□□□□ 0.28
SMAD9O15198 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD9O15198 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD9O15198 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.8■□□□□ 0.28
SMAD9O15198 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD9O15198 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD9O15198 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD9O15198 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMAD9O15198 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.79■□□□□ 0.28
SMAD9O15198 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD9O15198 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD9O15198 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD9O15198 AC006333.2-201ENST00000607957 2099 ntBASIC16.79■□□□□ 0.28
SMAD9O15198 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.79■□□□□ 0.28
SMAD9O15198 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD9O15198 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.79■□□□□ 0.28
SMAD9O15198 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD9O15198 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD9O15198 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD9O15198 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD9O15198 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.79■□□□□ 0.28
SMAD9O15198 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD9O15198 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD9O15198 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD9O15198 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SMAD9O15198 MCCD1P1-208ENST00000445732 328 ntBASIC16.79■□□□□ 0.28
SMAD9O15198 AC083906.6-201ENST00000641366 219 ntBASIC16.79■□□□□ 0.28
SMAD9O15198 AC068587.9-201ENST00000641814 219 ntBASIC16.79■□□□□ 0.28
SMAD9O15198 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SMAD9O15198 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SMAD9O15198 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SMAD9O15198 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD9O15198 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD9O15198 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.79■□□□□ 0.28
SMAD9O15198 LTB4R2-202ENST00000528054 3092 ntBASIC16.79■□□□□ 0.28
SMAD9O15198 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD9O15198 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms