Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX1O00570 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.65■□□□□ 0.74
SOX1O00570 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX1O00570 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX1O00570 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SOX1O00570 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.64■□□□□ 0.74
SOX1O00570 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SOX1O00570 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOX1O00570 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOX1O00570 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOX1O00570 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.64■□□□□ 0.73
SOX1O00570 LAGE3P1-201ENST00000425356 484 ntBASIC19.64■□□□□ 0.73
SOX1O00570 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.64■□□□□ 0.73
SOX1O00570 SIGLEC30P-201ENST00000455569 941 ntBASIC19.64■□□□□ 0.73
SOX1O00570 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.64■□□□□ 0.73
SOX1O00570 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOX1O00570 AC011467.2-201ENST00000598425 242 ntBASIC19.64■□□□□ 0.73
SOX1O00570 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOX1O00570 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SOX1O00570 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOX1O00570 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SOX1O00570 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.64■□□□□ 0.73
SOX1O00570 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOX1O00570 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOX1O00570 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.64■□□□□ 0.73
SOX1O00570 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.64■□□□□ 0.73
SOX1O00570 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.64■□□□□ 0.73
SOX1O00570 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOX1O00570 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SOX1O00570 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SOX1O00570 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SOX1O00570 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX1O00570 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.63■□□□□ 0.73
SOX1O00570 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.63■□□□□ 0.73
SOX1O00570 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.63■□□□□ 0.73
SOX1O00570 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX1O00570 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.63■□□□□ 0.73
SOX1O00570 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX1O00570 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX1O00570 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.63■□□□□ 0.73
SOX1O00570 GAPDHP21-201ENST00000450301 1010 ntBASIC19.63■□□□□ 0.73
SOX1O00570 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.63■□□□□ 0.73
SOX1O00570 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.63■□□□□ 0.73
SOX1O00570 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SOX1O00570 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.63■□□□□ 0.73
SOX1O00570 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SOX1O00570 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
SOX1O00570 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.63■□□□□ 0.73
SOX1O00570 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.63■□□□□ 0.73
SOX1O00570 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX1O00570 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX1O00570 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.62■□□□□ 0.73
SOX1O00570 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX1O00570 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SOX1O00570 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.62■□□□□ 0.73
SOX1O00570 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX1O00570 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX1O00570 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.62■□□□□ 0.73
SOX1O00570 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX1O00570 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX1O00570 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SOX1O00570 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.62■□□□□ 0.73
SOX1O00570 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.62■□□□□ 0.73
SOX1O00570 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX1O00570 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.62■□□□□ 0.73
SOX1O00570 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX1O00570 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX1O00570 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.62■□□□□ 0.73
SOX1O00570 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SOX1O00570 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.62■□□□□ 0.73
SOX1O00570 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.62■□□□□ 0.73
SOX1O00570 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.62■□□□□ 0.73
SOX1O00570 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.62■□□□□ 0.73
SOX1O00570 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.62■□□□□ 0.73
SOX1O00570 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.62■□□□□ 0.73
SOX1O00570 AC018845.2-201ENST00000568326 409 ntBASIC19.62■□□□□ 0.73
SOX1O00570 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.62■□□□□ 0.73
SOX1O00570 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.62■□□□□ 0.73
SOX1O00570 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX1O00570 FEM1AP4-201ENST00000443167 1987 ntBASIC19.62■□□□□ 0.73
SOX1O00570 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX1O00570 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.62■□□□□ 0.73
SOX1O00570 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SOX1O00570 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX1O00570 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX1O00570 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.61■□□□□ 0.73
SOX1O00570 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SOX1O00570 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX1O00570 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SOX1O00570 AC006333.2-201ENST00000607957 2099 ntBASIC19.61■□□□□ 0.73
SOX1O00570 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.61■□□□□ 0.73
SOX1O00570 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SOX1O00570 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.61■□□□□ 0.73
SOX1O00570 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX1O00570 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX1O00570 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX1O00570 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX1O00570 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SOX1O00570 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.61■□□□□ 0.73
SOX1O00570 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms