Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 SDHAP2-201ENST00000455183 2001 ntBASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 PVRIG2P-201ENST00000435460 978 ntBASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 AL136038.4-201ENST00000603606 1261 ntBASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
YJEFN3A6XGL0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 MIR149-201ENST00000384879 89 ntBASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 HLA-F-220ENST00000434407 884 ntBASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 AC009065.1-201ENST00000564055 1225 ntBASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
YJEFN3A6XGL0 AC009102.3-201ENST00000623118 1491 ntBASIC19.27■□□□□ 0.67
YJEFN3A6XGL0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
YJEFN3A6XGL0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.27■□□□□ 0.67
YJEFN3A6XGL0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 VENTXP5-201ENST00000523979 775 ntBASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 ZNF444P1-201ENST00000559497 298 ntBASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
YJEFN3A6XGL0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
YJEFN3A6XGL0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms