Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 KRT8P7-201ENST00000533003 1432 ntBASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 HOXB1-202ENST00000577092 1414 ntBASIC13.39□□□□□ -0.27
IGHV4-28A0A0C4DH34 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 AC006333.2-201ENST00000607957 2099 ntBASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 AL121956.5-201ENST00000625261 221 ntBASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 AL157888.1-201ENST00000631930 593 ntBASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 AL357033.4-201ENST00000617703 1807 ntBASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 LINC01311-201ENST00000565162 1445 ntBASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IGHV4-28A0A0C4DH34 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 Z98044.1-201ENST00000632503 1764 ntBASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 AL358472.4-201ENST00000633140 710 ntBASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 MTMR9LP-203ENST00000426597 1545 ntBASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 AC020763.4-201ENST00000623414 4170 ntBASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV4-28A0A0C4DH34 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV4-28A0A0C4DH34 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms