Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 PCDHB18P-201ENST00000524813 2368 ntBASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV27A0A087WT01 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 AL109659.2-201ENST00000606809 1674 ntBASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.8■□□□□ 0.28
TRAV27A0A087WT01 AL135905.2-201ENST00000584934 1404 ntBASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 AC142381.4-202ENST00000563973 229 ntBASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 MYLKP1-201ENST00000509077 1580 ntBASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 AC067852.2-201ENST00000590513 2313 ntBASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV27A0A087WT01 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV27A0A087WT01 MFAP1P1-201ENST00000442257 1255 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms