Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV30A0A087WSZ9 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.58□□□□□ -0.07
TRAV30A0A087WSZ9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV30A0A087WSZ9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV30A0A087WSZ9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.58□□□□□ -0.07
TRAV30A0A087WSZ9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV30A0A087WSZ9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 MTMR9LP-203ENST00000426597 1545 ntBASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 RPPH1-201ENST00000516869 333 ntBASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 CKBP1-201ENST00000565489 1086 ntBASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 PRORSD1P-202ENST00000563365 2154 ntBASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV30A0A087WSZ9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 AF186192.3-201ENST00000583427 947 ntBASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 AC130371.2-201ENST00000619443 611 ntBASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 FAM197Y4-202ENST00000622692 608 ntBASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 KRT8P45-201ENST00000414328 1447 ntBASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV30A0A087WSZ9 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms