Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PCDHGA11Q9Y5H2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18■□□□□ 0.47
PCDHGA11Q9Y5H2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA11Q9Y5H2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA11Q9Y5H2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PCDHGA11Q9Y5H2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA11Q9Y5H2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGA11Q9Y5H2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18■□□□□ 0.47
PCDHGA11Q9Y5H2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 AC020916.1-201ENST00000587762 1774 ntBASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 AC008622.2-201ENST00000617006 1229 ntBASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGA11Q9Y5H2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 KRT17P2-201ENST00000300992 1314 ntBASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 TSPY7P-201ENST00000431358 1114 ntBASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 RBM17P1-201ENST00000453646 1190 ntBASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 KRT8P45-201ENST00000414328 1447 ntBASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDHGA11Q9Y5H2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 AL023284.2-201ENST00000405850 579 ntBASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 MCCD1P1-208ENST00000445732 328 ntBASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA11Q9Y5H2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms