Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.27■□□□□ 0.84
L1RE1Q9UN81 MIR4674-201ENST00000582457 87 ntBASIC20.27■□□□□ 0.84
L1RE1Q9UN81 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.27■□□□□ 0.84
L1RE1Q9UN81 AC008622.2-201ENST00000617006 1229 ntBASIC20.27■□□□□ 0.84
L1RE1Q9UN81 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
L1RE1Q9UN81 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
L1RE1Q9UN81 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.27■□□□□ 0.84
L1RE1Q9UN81 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
L1RE1Q9UN81 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
L1RE1Q9UN81 IRX1P1-201ENST00000438849 1838 ntBASIC20.27■□□□□ 0.84
L1RE1Q9UN81 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
L1RE1Q9UN81 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
L1RE1Q9UN81 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
L1RE1Q9UN81 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
L1RE1Q9UN81 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
L1RE1Q9UN81 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 LIN28AP1-201ENST00000429574 405 ntBASIC20.25■□□□□ 0.83
L1RE1Q9UN81 ATP5G1P1-201ENST00000448724 379 ntBASIC20.25■□□□□ 0.83
L1RE1Q9UN81 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.25■□□□□ 0.83
L1RE1Q9UN81 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.24■□□□□ 0.83
L1RE1Q9UN81 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 AC139713.2-201ENST00000641328 2723 ntBASIC20.24■□□□□ 0.83
L1RE1Q9UN81 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 AL138966.2-201ENST00000621997 464 ntBASIC20.24■□□□□ 0.83
L1RE1Q9UN81 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.24■□□□□ 0.83
L1RE1Q9UN81 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
L1RE1Q9UN81 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms