Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PARPBPQ9NWS1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PARPBPQ9NWS1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.6■□□□□ 0.25
PARPBPQ9NWS1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PARPBPQ9NWS1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.6■□□□□ 0.25
PARPBPQ9NWS1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PARPBPQ9NWS1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PARPBPQ9NWS1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.6■□□□□ 0.25
PARPBPQ9NWS1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PARPBPQ9NWS1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PARPBPQ9NWS1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.6■□□□□ 0.25
PARPBPQ9NWS1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PARPBPQ9NWS1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PARPBPQ9NWS1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PARPBPQ9NWS1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.6■□□□□ 0.25
PARPBPQ9NWS1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 MIR564-202ENST00000385049 94 ntBASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 BX664615.1-201ENST00000443558 458 ntBASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 MIR4674-201ENST00000582457 87 ntBASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 AC092865.7-201ENST00000641832 219 ntBASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 KRT8P45-201ENST00000414328 1447 ntBASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 KRT8P7-201ENST00000533003 1432 ntBASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PARPBPQ9NWS1 AC008556.1-201ENST00000610908 2040 ntBASIC16.58■□□□□ 0.25
PARPBPQ9NWS1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PARPBPQ9NWS1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.25
PARPBPQ9NWS1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PARPBPQ9NWS1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PARPBPQ9NWS1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PARPBPQ9NWS1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PARPBPQ9NWS1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
PARPBPQ9NWS1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 TERF1P1-201ENST00000311003 1181 ntBASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 AC005521.1-201ENST00000393351 872 ntBASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 AC141257.4-201ENST00000634557 245 ntBASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 AC136944.6-201ENST00000634818 245 ntBASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 TNXA-203ENST00000507684 2038 ntBASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 AC006333.2-201ENST00000607957 2099 ntBASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
PARPBPQ9NWS1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PARPBPQ9NWS1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PARPBPQ9NWS1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PARPBPQ9NWS1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PARPBPQ9NWS1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.57■□□□□ 0.24
PARPBPQ9NWS1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PARPBPQ9NWS1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PARPBPQ9NWS1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PARPBPQ9NWS1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms