Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 FSCN1P1-201ENST00000568912 1481 ntBASIC17.3■□□□□ 0.36
RLIMQ9NVW2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 AC008764.6-201ENST00000595909 2069 ntBASIC17.29■□□□□ 0.36
RLIMQ9NVW2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 RPS2P55-201ENST00000397318 883 ntBASIC17.29■□□□□ 0.36
RLIMQ9NVW2 UBE2SP1-201ENST00000450587 669 ntBASIC17.29■□□□□ 0.36
RLIMQ9NVW2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 AC107956.1-201ENST00000494359 873 ntBASIC17.29■□□□□ 0.36
RLIMQ9NVW2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RLIMQ9NVW2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 ABHD17AP1-201ENST00000358206 933 ntBASIC17.28■□□□□ 0.36
RLIMQ9NVW2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 AL162741.1-201ENST00000565563 1558 ntBASIC17.28■□□□□ 0.36
RLIMQ9NVW2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.28■□□□□ 0.36
RLIMQ9NVW2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RLIMQ9NVW2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RLIMQ9NVW2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RLIMQ9NVW2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.27■□□□□ 0.36
RLIMQ9NVW2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RLIMQ9NVW2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RLIMQ9NVW2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RLIMQ9NVW2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RLIMQ9NVW2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RLIMQ9NVW2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RLIMQ9NVW2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RLIMQ9NVW2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms