Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AC112497.1-201ENST00000624824 639 ntBASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 AC097493.4-201ENST00000641197 219 ntBASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN4Q9NRR5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 AP000523.1-201ENST00000398242 1049 ntBASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 SLC25A3P1-201ENST00000443844 931 ntBASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.03■□□□□ 0.32
UBQLN4Q9NRR5 NEK4P2-201ENST00000580004 1012 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms