Protein–RNA interactions for Protein: Q9NRG0

CHRAC1, Chromatin accessibility complex protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1Q9NRG0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRAC1Q9NRG0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CHRAC1Q9NRG0 KRT18P41-201ENST00000518924 1277 ntBASIC18.69■□□□□ 0.58
CHRAC1Q9NRG0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.69■□□□□ 0.58
CHRAC1Q9NRG0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.69■□□□□ 0.58
CHRAC1Q9NRG0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRAC1Q9NRG0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.69■□□□□ 0.58
CHRAC1Q9NRG0 AC135776.1-201ENST00000319817 2481 ntBASIC18.69■□□□□ 0.58
CHRAC1Q9NRG0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRAC1Q9NRG0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRAC1Q9NRG0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRAC1Q9NRG0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRAC1Q9NRG0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRAC1Q9NRG0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.69■□□□□ 0.58
CHRAC1Q9NRG0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.69■□□□□ 0.58
CHRAC1Q9NRG0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CHRAC1Q9NRG0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.69■□□□□ 0.58
CHRAC1Q9NRG0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CHRAC1Q9NRG0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 AL023803.3-201ENST00000615559 522 ntBASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRAC1Q9NRG0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 AC099343.3-201ENST00000605834 2503 ntBASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 AL355075.4-201ENST00000554988 638 ntBASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 FITM1-202ENST00000559294 800 ntBASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 AL133373.2-201ENST00000623187 2828 ntBASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRAC1Q9NRG0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 NOC2LP1-202ENST00000452600 2235 ntBASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 SLC25A1P2-201ENST00000430693 912 ntBASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 AP003041.3-201ENST00000527151 707 ntBASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 AL353719.1-201ENST00000566847 864 ntBASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 AL162741.1-201ENST00000565563 1558 ntBASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 AC034236.2-201ENST00000606662 1610 ntBASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CHRAC1Q9NRG0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRAC1Q9NRG0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRAC1Q9NRG0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHRAC1Q9NRG0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms