Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 AP000593.1-201ENST00000393668 712 ntBASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 SPDYE15P-201ENST00000424157 909 ntBASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 KRT18P38-201ENST00000449496 1282 ntBASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC6A20Q9NP91 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 MYLKP1-201ENST00000509077 1580 ntBASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 AL359075.1-203ENST00000462729 1002 ntBASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 AL157888.1-201ENST00000631930 593 ntBASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC6A20Q9NP91 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 AC126763.1-201ENST00000552015 2118 ntBASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 MIR3917-201ENST00000580971 93 ntBASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 MYC-208ENST00000641036 567 ntBASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 AC005082.1-201ENST00000413042 2259 ntBASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC6A20Q9NP91 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A20Q9NP91 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A20Q9NP91 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A20Q9NP91 AL138781.2-201ENST00000617896 1843 ntBASIC17.77■□□□□ 0.44
SLC6A20Q9NP91 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A20Q9NP91 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SLC6A20Q9NP91 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC6A20Q9NP91 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms