Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 KRT18P29-201ENST00000397031 1267 ntBASIC17.86■□□□□ 0.45
LRTM1Q9HBL6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.86■□□□□ 0.45
LRTM1Q9HBL6 CD177P1-201ENST00000606252 935 ntBASIC17.86■□□□□ 0.45
LRTM1Q9HBL6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.86■□□□□ 0.45
LRTM1Q9HBL6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.86■□□□□ 0.45
LRTM1Q9HBL6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.86■□□□□ 0.45
LRTM1Q9HBL6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRTM1Q9HBL6 MYLKP1-201ENST00000509077 1580 ntBASIC17.86■□□□□ 0.45
LRTM1Q9HBL6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LRTM1Q9HBL6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRTM1Q9HBL6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRTM1Q9HBL6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRTM1Q9HBL6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRTM1Q9HBL6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRTM1Q9HBL6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRTM1Q9HBL6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 AC135776.1-201ENST00000319817 2481 ntBASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 AC008622.2-201ENST00000617006 1229 ntBASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 AC005332.8-201ENST00000622750 2735 ntBASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LRTM1Q9HBL6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 KRT18P41-201ENST00000518924 1277 ntBASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 LETM1P2-201ENST00000597330 2178 ntBASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRTM1Q9HBL6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.83■□□□□ 0.45
LRTM1Q9HBL6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.83■□□□□ 0.45
LRTM1Q9HBL6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRTM1Q9HBL6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRTM1Q9HBL6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.83■□□□□ 0.45
LRTM1Q9HBL6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.83■□□□□ 0.45
LRTM1Q9HBL6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.83■□□□□ 0.45
LRTM1Q9HBL6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LRTM1Q9HBL6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.83■□□□□ 0.45
LRTM1Q9HBL6 AC096733.2-201ENST00000609937 1394 ntBASIC17.83■□□□□ 0.45
LRTM1Q9HBL6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
LRTM1Q9HBL6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LRTM1Q9HBL6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRTM1Q9HBL6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LRTM1Q9HBL6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.83■□□□□ 0.44
LRTM1Q9HBL6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRTM1Q9HBL6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
LRTM1Q9HBL6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.83■□□□□ 0.44
LRTM1Q9HBL6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.83■□□□□ 0.44
LRTM1Q9HBL6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.83■□□□□ 0.44
LRTM1Q9HBL6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
LRTM1Q9HBL6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.83■□□□□ 0.44
LRTM1Q9HBL6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.83■□□□□ 0.44
LRTM1Q9HBL6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRTM1Q9HBL6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRTM1Q9HBL6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRTM1Q9HBL6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRTM1Q9HBL6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRTM1Q9HBL6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.83■□□□□ 0.44
LRTM1Q9HBL6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRTM1Q9HBL6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRTM1Q9HBL6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRTM1Q9HBL6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms