Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.73■□□□□ 0.43
PIF1Q9H611 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PIF1Q9H611 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PIF1Q9H611 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
PIF1Q9H611 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PIF1Q9H611 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PIF1Q9H611 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PIF1Q9H611 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PIF1Q9H611 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PIF1Q9H611 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PIF1Q9H611 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PIF1Q9H611 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.73■□□□□ 0.43
PIF1Q9H611 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.73■□□□□ 0.43
PIF1Q9H611 UNC93B4-201ENST00000505679 747 ntBASIC17.73■□□□□ 0.43
PIF1Q9H611 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.73■□□□□ 0.43
PIF1Q9H611 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PIF1Q9H611 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.73■□□□□ 0.43
PIF1Q9H611 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.73■□□□□ 0.43
PIF1Q9H611 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.73■□□□□ 0.43
PIF1Q9H611 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PIF1Q9H611 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PIF1Q9H611 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PIF1Q9H611 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PIF1Q9H611 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PIF1Q9H611 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PIF1Q9H611 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PIF1Q9H611 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PIF1Q9H611 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PIF1Q9H611 MTMR9LP-203ENST00000426597 1545 ntBASIC17.72■□□□□ 0.43
PIF1Q9H611 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.72■□□□□ 0.43
PIF1Q9H611 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.72■□□□□ 0.43
PIF1Q9H611 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PIF1Q9H611 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PIF1Q9H611 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
PIF1Q9H611 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PIF1Q9H611 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PIF1Q9H611 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PIF1Q9H611 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.72■□□□□ 0.43
PIF1Q9H611 NBPF21P-201ENST00000425093 1451 ntBASIC17.72■□□□□ 0.43
PIF1Q9H611 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PIF1Q9H611 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PIF1Q9H611 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PIF1Q9H611 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PIF1Q9H611 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PIF1Q9H611 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PIF1Q9H611 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.72■□□□□ 0.43
PIF1Q9H611 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PIF1Q9H611 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PIF1Q9H611 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.72■□□□□ 0.43
PIF1Q9H611 KRT8P41-201ENST00000533985 1514 ntBASIC17.72■□□□□ 0.43
PIF1Q9H611 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PIF1Q9H611 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PIF1Q9H611 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PIF1Q9H611 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
PIF1Q9H611 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.71■□□□□ 0.43
PIF1Q9H611 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.71■□□□□ 0.43
PIF1Q9H611 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.71■□□□□ 0.43
PIF1Q9H611 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
PIF1Q9H611 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PIF1Q9H611 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
PIF1Q9H611 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PIF1Q9H611 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.71■□□□□ 0.43
PIF1Q9H611 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.71■□□□□ 0.43
PIF1Q9H611 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PIF1Q9H611 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PIF1Q9H611 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PIF1Q9H611 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PIF1Q9H611 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PIF1Q9H611 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.71■□□□□ 0.43
PIF1Q9H611 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
PIF1Q9H611 PRKY-204ENST00000533551 1019 ntBASIC17.71■□□□□ 0.43
PIF1Q9H611 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PIF1Q9H611 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.71■□□□□ 0.43
PIF1Q9H611 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PIF1Q9H611 AC106820.2-201ENST00000563775 3264 ntBASIC17.71■□□□□ 0.43
PIF1Q9H611 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PIF1Q9H611 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PIF1Q9H611 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PIF1Q9H611 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PIF1Q9H611 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
PIF1Q9H611 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.71■□□□□ 0.43
PIF1Q9H611 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.71■□□□□ 0.43
PIF1Q9H611 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.71■□□□□ 0.43
PIF1Q9H611 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
PIF1Q9H611 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PIF1Q9H611 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
PIF1Q9H611 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PIF1Q9H611 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PIF1Q9H611 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
PIF1Q9H611 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PIF1Q9H611 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PIF1Q9H611 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PIF1Q9H611 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.7■□□□□ 0.42
PIF1Q9H611 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
PIF1Q9H611 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PIF1Q9H611 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PIF1Q9H611 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.7■□□□□ 0.42
PIF1Q9H611 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
PIF1Q9H611 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PIF1Q9H611 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms