Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 AP002982.1-201ENST00000492365 877 ntBASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 AC134043.2-201ENST00000624206 2238 ntBASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 KRT16P1-201ENST00000399124 1418 ntBASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 AC011298.2-201ENST00000617989 482 ntBASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.81■□□□□ 0.6
PHACTR1Q9C0D0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 MIR564-202ENST00000385049 94 ntBASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 KRT18P6-201ENST00000555540 1265 ntBASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 AL031985.4-201ENST00000642138 673 ntBASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PHACTR1Q9C0D0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHACTR1Q9C0D0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms