Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NDUFAF3Q9BU61 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.33□□□□□ -0.11
NDUFAF3Q9BU61 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 AC008687.6-201ENST00000596318 630 ntBASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFAF3Q9BU61 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 AC011676.5-201ENST00000624864 2660 ntBASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 AC092368.3-202ENST00000574180 1591 ntBASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFAF3Q9BU61 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 PRORSD1P-201ENST00000295112 541 ntBASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NDUFAF3Q9BU61 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms