Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 DGCR10-201ENST00000609839 495 ntBASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
YIPF4Q9BSR8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 AC008556.1-201ENST00000610908 2040 ntBASIC17.47■□□□□ 0.39
YIPF4Q9BSR8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
YIPF4Q9BSR8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
YIPF4Q9BSR8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
YIPF4Q9BSR8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
YIPF4Q9BSR8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
YIPF4Q9BSR8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
YIPF4Q9BSR8 AC018470.1-201ENST00000624790 3129 ntBASIC17.46■□□□□ 0.39
YIPF4Q9BSR8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
YIPF4Q9BSR8 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
YIPF4Q9BSR8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.46■□□□□ 0.39
YIPF4Q9BSR8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.46■□□□□ 0.39
YIPF4Q9BSR8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
YIPF4Q9BSR8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
YIPF4Q9BSR8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.46■□□□□ 0.39
YIPF4Q9BSR8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
YIPF4Q9BSR8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
YIPF4Q9BSR8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
YIPF4Q9BSR8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.46■□□□□ 0.39
YIPF4Q9BSR8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
YIPF4Q9BSR8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.46■□□□□ 0.38
YIPF4Q9BSR8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 AC087499.1-201ENST00000418141 1075 ntBASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 AC010331.1-201ENST00000611423 582 ntBASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF4Q9BSR8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms