Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.52■□□□□ 0.39
TUBA1CQ9BQE3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TUBA1CQ9BQE3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TUBA1CQ9BQE3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
TUBA1CQ9BQE3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TUBA1CQ9BQE3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.52■□□□□ 0.39
TUBA1CQ9BQE3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TUBA1CQ9BQE3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TUBA1CQ9BQE3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.52■□□□□ 0.39
TUBA1CQ9BQE3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 AC211429.1-201ENST00000415277 523 ntBASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 REXO1L10P-201ENST00000615707 1290 ntBASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.51■□□□□ 0.39
TUBA1CQ9BQE3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 ECEL1P3-201ENST00000427961 737 ntBASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 AL445675.2-201ENST00000620291 557 ntBASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 GNAS-203ENST00000306120 1878 ntBASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 AC126763.1-201ENST00000552015 2118 ntBASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 AC124067.4-201ENST00000519691 2379 ntBASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBA1CQ9BQE3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1CQ9BQE3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
TUBA1CQ9BQE3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.49■□□□□ 0.39
TUBA1CQ9BQE3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms