Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
ABCA3Q99758 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC24.63■■□□□ 1.53
ABCA3Q99758 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC24.63■■□□□ 1.53
ABCA3Q99758 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ABCA3Q99758 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ABCA3Q99758 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC24.62■■□□□ 1.53
ABCA3Q99758 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
ABCA3Q99758 FEM1AP3-201ENST00000403722 1741 ntBASIC24.62■■□□□ 1.53
ABCA3Q99758 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ABCA3Q99758 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC24.62■■□□□ 1.53
ABCA3Q99758 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ABCA3Q99758 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
ABCA3Q99758 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC24.62■■□□□ 1.53
ABCA3Q99758 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC24.62■■□□□ 1.53
ABCA3Q99758 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ABCA3Q99758 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC24.62■■□□□ 1.53
ABCA3Q99758 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ABCA3Q99758 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ABCA3Q99758 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ABCA3Q99758 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC24.61■■□□□ 1.53
ABCA3Q99758 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ABCA3Q99758 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC24.61■■□□□ 1.53
ABCA3Q99758 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC24.61■■□□□ 1.53
ABCA3Q99758 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC24.61■■□□□ 1.53
ABCA3Q99758 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ABCA3Q99758 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
ABCA3Q99758 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
ABCA3Q99758 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ABCA3Q99758 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.61■■□□□ 1.53
ABCA3Q99758 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ABCA3Q99758 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ABCA3Q99758 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC24.61■■□□□ 1.53
ABCA3Q99758 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
ABCA3Q99758 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ABCA3Q99758 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ABCA3Q99758 MIR149-201ENST00000384879 89 ntBASIC24.61■■□□□ 1.53
ABCA3Q99758 PMP22-202ENST00000395936 816 ntTSL 3 BASIC24.61■■□□□ 1.53
ABCA3Q99758 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC24.61■■□□□ 1.53
ABCA3Q99758 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ABCA3Q99758 COPE-211ENST00000600932 1144 ntTSL 5 BASIC24.61■■□□□ 1.53
ABCA3Q99758 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ABCA3Q99758 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ABCA3Q99758 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC24.6■■□□□ 1.53
ABCA3Q99758 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC24.6■■□□□ 1.53
ABCA3Q99758 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC24.6■■□□□ 1.53
ABCA3Q99758 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ABCA3Q99758 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
ABCA3Q99758 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC24.6■■□□□ 1.53
ABCA3Q99758 DANCR-204ENST00000444958 709 ntTSL 3 BASIC24.6■■□□□ 1.53
ABCA3Q99758 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC24.6■■□□□ 1.53
ABCA3Q99758 RNA5SP416-201ENST00000516838 111 ntBASIC24.6■■□□□ 1.53
ABCA3Q99758 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC24.6■■□□□ 1.53
ABCA3Q99758 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC24.6■■□□□ 1.53
ABCA3Q99758 RNF151-202ENST00000569210 853 ntTSL 2 BASIC24.6■■□□□ 1.53
ABCA3Q99758 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC24.6■■□□□ 1.53
ABCA3Q99758 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
ABCA3Q99758 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ABCA3Q99758 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
ABCA3Q99758 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC24.6■■□□□ 1.53
ABCA3Q99758 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC24.6■■□□□ 1.53
ABCA3Q99758 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC24.6■■□□□ 1.53
ABCA3Q99758 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ABCA3Q99758 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC24.6■■□□□ 1.53
ABCA3Q99758 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
ABCA3Q99758 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ABCA3Q99758 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
ABCA3Q99758 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC24.59■■□□□ 1.53
ABCA3Q99758 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
ABCA3Q99758 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC24.59■■□□□ 1.53
ABCA3Q99758 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
ABCA3Q99758 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ABCA3Q99758 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
ABCA3Q99758 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ABCA3Q99758 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ABCA3Q99758 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ABCA3Q99758 NFYC-AS1-201ENST00000606277 1687 ntBASIC24.59■■□□□ 1.53
ABCA3Q99758 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ABCA3Q99758 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
ABCA3Q99758 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
ABCA3Q99758 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
ABCA3Q99758 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
ABCA3Q99758 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
ABCA3Q99758 COA5-202ENST00000409997 557 ntTSL 4 BASIC24.58■■□□□ 1.53
ABCA3Q99758 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
ABCA3Q99758 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC24.58■■□□□ 1.53
ABCA3Q99758 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC24.58■■□□□ 1.53
ABCA3Q99758 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC24.58■■□□□ 1.53
ABCA3Q99758 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC24.58■■□□□ 1.53
ABCA3Q99758 AC107918.4-202ENST00000641623 219 ntBASIC24.58■■□□□ 1.53
ABCA3Q99758 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
ABCA3Q99758 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
ABCA3Q99758 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC24.58■■□□□ 1.53
ABCA3Q99758 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC24.58■■□□□ 1.53
ABCA3Q99758 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
ABCA3Q99758 CRCP-205ENST00000431089 942 ntTSL 2 BASIC24.58■■□□□ 1.52
ABCA3Q99758 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC24.58■■□□□ 1.52
ABCA3Q99758 UNC93B6-202ENST00000528242 690 ntBASIC24.58■■□□□ 1.52
ABCA3Q99758 MTDHP4-201ENST00000600287 670 ntBASIC24.58■■□□□ 1.52
ABCA3Q99758 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
ABCA3Q99758 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms